Populus trichocarpa (black cottonwood): 18098100
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Entry
18098100 CDS
T01077
Name
(RefSeq) transcription factor E2FB isoform X2
KO
K06620
transcription factor E2F3
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
18098100
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
18098100
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GFIT
Motif
Pfam:
E2F_CC-MB
WHD_E2F_TDP
SKA1
GCN5L1
TrmB
UPF0242
Spc24
Motif
Other DBs
NCBI-GeneID:
18098100
NCBI-ProteinID:
XP_006384787
UniProt:
U5GK73
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Position
4:complement(21100173..21106190)
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AA seq
474 aa
AA seq
DB search
MSNSQAQNNQSMKQPQQSSMQSHAPNQRQHQQPLSFSSMKPPFLPPGDYHRFGDDRRRAV
SDHEVEGIVVKPPTLKRKSDAADHQGESSDWNAGHGYMEVVTSPLQTPVSGKGGKTPKTS
RLSKSSKSGSQSAAAALGSPGNNLTPSGPCRYDSSLGLLTKKFINLIKHAEDGILDLNKA
AETLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSRPGEADDNNVATLQAEVENL
TMEERRLDEQTREMQERLRDLSEDENNQKWLFVTEEDIKSLPGFQNETLIAIKAPHGTTL
EVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQFEEKIEDIQGVEPPPSYPSTSGFNEN
PATTMTMEESRGKEVEMQEQDGHRMCSELNTAHDFVSGIMKIVPSDVDSDADYWLLSDPG
VSITDMWRNEPVVEWNDLDTLHNDYVMPNVCTPQPQTPPSNPTEVPPGTNTTAG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattctcaagcacaaaacaaccaatcaatgaagcagccgcagcaaagcagtatg
cagagtcacgcaccgaatcagcgccagcatcagcaaccgctttcgttttcttcaatgaag
ccaccgtttttgcctccgggtgactaccaccggttcggtgacgaccgacgacgtgccgtt
tctgatcatgaagttgagggcattgttgtgaaacctcctacattaaagcggaagagtgat
gcagcagatcatcaaggtgagtccagtgactggaatgctggtcatggatatatggaagta
gtgaccagccccctgcagacacctgtatcaggaaaagggggaaagacacccaaaacatca
agactctcaaagagcagtaaatctggatctcagagtgctgctgctgctcttggttctcct
ggaaataatcttactccatctggtccatgtcgctatgacagctctctaggtctcttgact
aaaaaattcatcaatttgatcaaacatgctgaagatggcatccttgatctcaataaagct
gctgagactttagaggttcaaaaaaggcggatatatgacataacaaatgttctagaagga
attggtcttatagaaaagaagctcaaaaatagaattcagtggaagggacttgatgtatcg
aggccaggggaggcggatgataataacgttgccactttgcaggcagaagttgaaaacctg
accatggaggaacgcagattagatgaacaaacaagagaaatgcaagaaagattgagggac
ctcagtgaagatgaaaataatcaaaagtggctttttgtcactgaggaagacatcaagagc
ttacctggcttccagaatgaaaccttgatagcaattaaagctccacatggtaccactcta
gaagtcccagatcccgatgaggcagttgattatcctcagaggagatacaggatagtcctt
aggagtacaatgggcccaatagatgtttatcttgtcagtcaatttgaagagaaaattgag
gatattcaaggtgttgagccacctccaagctatccatcaacctcaggcttcaatgaaaat
ccagctactacaatgaccatggaggagagcagaggaaaggaggttgaaatgcaggaacaa
gatggtcatagaatgtgctcagaacttaacaccgcacatgactttgtgagtgggatcatg
aagattgttccctcagatgttgatagtgatgcagattactggcttttatcagatcctggt
gttagcattacagacatgtggcgtaacgaacctgtggttgaatggaatgacttggacaca
cttcataatgattatgtcatgccaaatgtctgcacaccacagccccaaactccaccatct
aatccaacagaagtgcctcccggtactaacacgactgctggatga
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