Populus trichocarpa (black cottonwood): 18098136
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Entry
18098136 CDS
T01077
Name
(RefSeq) SEC1 family transport protein SLY1
KO
K19998
sec1 family domain-containing protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
18098136
Membrane trafficking [BR:
pop04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
18098136
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
18098136
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
18098136
NCBI-ProteinID:
XP_006384832
UniProt:
B9MYY5
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Position
4:complement(21299022..21301634)
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AA seq
622 aa
AA seq
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MALNLRQKQTECIIRMLNLNQPLNATGTTNEEVYKILIYDKFCQNILSPLIHVKDLRKHG
VTLYFLIDKDRKPVHDVPAVYFVQPSKVNVQRIVADASQSLYDSFHLNFSSSIPRPLLED
LASGTLNSESIDKISKVHDQYLEFVTLENNLFSLAQKSCYVQLNDPSAGDREIEEIVEKV
ASGLFSVLATLAVVPVIRCPRGGPAEMVASVLDQKLRDHLLSKNNLFTEGGGFASSFQRP
VLCLFDRNFELSVGIQHDFRYRPLVHDVLGLRLNRLSVQGEKGGMRSYELDSSDPFWVAN
GSLEFPEVAVEIETQLNKYKKDVDEVNRRTGETDGAEFDGTDLIGNTKHLMNAVNSLPEL
TERKQVIDKHTNIATVLLGEIKERSLDSYAKKENDMMVRGGIDRNELLGVLRGKGTKIDK
LRFAIIYLICSESINQSEVEAIETALRESEVDNCAFQYVKKMKSLNVSLASANSASRSNI
VDWAEKLYGQSISAVTAGVKNLLSSDRQLALTRTVEALMEGKPNPEVDSYLVFDPRAPKS
GSGTSSSHLKGPFKEAIVFMIGGGNYMEYGSLQEFAQRQQPVKHVIYGTTEILTGMEFVE
QLTVLGQKMGLGSSVAPPAPTH
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggctctcaatctgcgtcaaaaacaaacagaatgtataatccggatgctaaatctgaac
caacctttgaatgcaactggtactactaatgaagaggtttacaagatcttgatctatgat
aagttttgtcaaaatatactatctccattgattcatgtcaaggatctgagaaaacatggg
gttactctttatttccttattgataaggatcgaaagcctgtccatgatgtccctgctgtg
tactttgttcaaccaagtaaagttaatgttcagaggattgttgctgatgcgtcacaatcg
ctttatgatagcttccacctgaatttttcgtcgtccattcctcgtccacttcttgaggat
cttgcatctgggacattgaattcagagtctatagataagatttcaaaggtgcatgatcag
tatttggagtttgtgactttggagaataatttgttttcgttggcacagaagtcttgctat
gttcagttgaatgatccgtctgctggtgatagagagattgaggagattgttgagaaggtt
gctagtgggttattttctgtgttggcaacacttgcggttgtgccagttattaggtgtccg
cgtggtggcccagcagagatggtggcatcagtgctggatcagaagttgagggatcattta
ttgtcgaagaacaatttgtttacagaaggtgggggttttgcgagctcttttcagaggcca
gttttgtgtctatttgatcggaattttgaattgtcagtgggaatacagcatgattttagg
tatcgtcctcttgttcatgatgttcttggcttgaggcttaataggttgagtgtgcaaggg
gaaaagggtgggatgaggtcatatgagttggacagttctgatccattttgggtggcaaat
gggtctctagagtttcctgaagttgcagtggaaattgagactcagttgaacaagtacaag
aaggatgttgatgaggtgaataggaggactggagaaactgatggggctgaatttgacggg
acggatttgatcgggaacacaaagcatttgatgaatgctgtgaactccctgcctgaactg
acagaacggaagcaggtgattgataaacacacgaacattgcaactgttttgttgggtgag
atcaaggagaggtctcttgattcctatgcgaaaaaagagaatgacatgatggtcagagga
gggattgatcggaatgaacttttgggtgtgcttagagggaaaggaaccaagattgataaa
cttagatttgcaatcatttaccttatatgttctgaaagtattaatcaatcagaagtggaa
gcaattgaaactgctcttagggagtctgaggttgataattgtgcattccagtacgtgaag
aaaatgaagtccttgaatgtttcattggcatcagcaaattctgccagtcgaagtaacatt
gttgattgggctgaaaaactttatgggcagtcaattagtgctgtgacagctggcgtgaag
aatttattatctagtgatagacagctggcattaacgaggactgtggaagctttgatggag
gggaagccaaatcctgaagttgattcttaccttgtgtttgatccacgtgctcccaagtca
ggttctggtaccagtagcagccatctgaaagggccatttaaagaagctatagtgtttatg
attggtggtggtaattatatggagtatggcagcttgcaagaatttgcacagcgtcagcag
cctgtcaagcatgttatatatggaacaacagagattctcacaggaatggagtttgttgag
cagcttacagtgttgggacagaagatgggattgggtagtagtgttgctccccctgctcca
acccactag
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