Populus trichocarpa (black cottonwood): 18098150
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Entry
18098150 CDS
T01077
Name
(RefSeq) probable galacturonosyltransferase 3 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00520
Amino sugar and nucleotide sugar metabolism
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
18098150
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pop01003
]
18098150
Enzymes [BR:
pop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
18098150
Glycosyltransferases [BR:
pop01003
]
Polysaccharide
Structural polysaccharide
18098150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
18098150
NCBI-ProteinID:
XP_024455538
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All DBs
Position
4:complement(21369962..21374162)
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AA seq
683 aa
AA seq
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MEEQRRRRRRRFWTSSSLALLLIFFMVVRADLSDYNPTLQREPKAHHRRLHQEHDASSVA
GHGVQSDEMDINIIATYSDTSGAVRTSRVKMSDLSPSWVLENPADKNHDQPKTSQFQRLE
DSSKAGATHEDDVLHSARDHQYGEGGIPSSWKLPMSPVKLQRQTARKDRRVLRTSVLIQQ
DKGAADSQTEATAFIWSKSLDTSIKGKYSIWRRDFDSPNSDSTLKLMRDQIIMAKAYANI
AKSNNVTTLYNSLMKQSRESQLAIGEAMSDAELHPSALVQAKAMGHVLSIAKDQLYECPT
MSRKLRAMLQLNEENVNALKKKSAFLIQLAAKTIPKPLHCLPLQLAADYFLYGYQNKKYL
DKEKVQDPSLFHYAIFSDNVLATSVVINSTVQHAKDPQKHVFHIVTDKLNFAAMKMWFIV
NPPAKATVQVENIDDFKWLNASYCSVLRQLESARIKEYYFKANHPSSLASGADNLKYRNP
KYLSMLNHLRFYLPEVYPKLDKILFLDDDIVVQKDLTPLWSIDLQGMVNGAVETCKESFH
RFDKYLNFSNPKIYNNFDPNACGWAFGMNMFDLKQWKRSNITGIYHHWQDLNEDRTLWKL
GSLPPGLITFYNLTYPLDRSWHVLGLGYDPALNQTEIENAAVVHYNGNYKPWLDLAVAKY
KPYWSRYVQYDNPYLQQCNIVEE
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacagagaaggaggagaagaagaagattctggacttcaagctctctagctctt
cttctgatcttcttcatggttgttcgtgcagatttatcagattataatccaactcttcaa
agagagcccaaagcgcatcatcggcgattacatcaggaacatgatgcttcttctgtggct
gggcacggggttcaatcagatgaaatggatatcaacataattgcaacatacagtgacact
tctggtgctgttcgaacgagtagggtgaaaatgagtgacctgtctccttcttgggtcttg
gaaaaccctgcagataaaaatcatgatcagccaaagacttcccagtttcagagattagaa
gattcatcaaaagctggagcaacacatgaagatgatgtgctgcattctgcgagggatcat
caatatggtgaaggtggaatcccatcttcttggaagttaccaatgagcccagtgaagctc
cagcgccagacagcacggaaggacaggagggtactccgaacttcagtgctaattcaacaa
gataaaggagctgctgacagccagacagaagcaactgcatttatatggtccaaaagcctg
gacacttctatcaagggaaagtacagtatatggaggagagattttgatagtccaaattct
gattctactctgaaactcatgcgggaccagattataatggccaaagcttatgcaaatatt
gccaaatcaaacaatgtaactacactttacaactctcttatgaaacagtcgagagaaagc
cagcttgctattggagaagcaatgtctgatgcagagcttcacccaagcgcacttgttcaa
gcaaaagcaatggggcatgttttgtctatagcaaaggatcaactatacgaatgtcctaca
atgtctcggaagttaagggccatgctccagttaaatgaagagaatgtaaatgctttgaag
aaaaaaagtgcgttcttgattcaactagcagcaaaaacaatcccaaaaccattacactgt
cttcctctgcagcttgcagctgactatttcctatatggttatcaaaacaagaagtatttg
gacaaagaaaaggttcaagatccgtctttgttccactatgctatcttctctgataatgtg
ctcgcaacatctgtggttatcaattccactgtgcagcatgcaaaagatccacagaaacat
gttttccatatagtcacagataaactgaactttgctgcgatgaaaatgtggtttattgtc
aatcctccagccaaagcaacagttcaagttgaaaatattgatgattttaagtggttgaat
gcctcttactgttctgttttacgtcaacttgaatctgcccggattaaagaatactatttc
aaggctaatcacccttcctctcttgcttctggtgctgacaatctcaaatataggaatcca
aaatatttatctatgctgaatcatcttcgattctatcttcctgaagtatatccaaaacta
gataagatccttttcttggatgatgacattgtagttcagaaggatttgacaccactttgg
tccattgatctacaagggatggtaaatggtgcagtggagacatgtaaggagagctttcat
aggtttgacaagtatctaaacttctcgaatccaaagatctacaacaattttgatccaaat
gcttgcggttgggcatttggcatgaacatgtttgacttgaagcagtggaaaaggtcgaat
atcactgggatatatcatcactggcaagatctgaatgaggatagaactctttggaaattg
ggctcgttgccaccgggactgataaccttctataacctaacctatccactggaccgaagt
tggcatgtcttgggacttggttatgacccggctcttaaccaaactgagatagagaatgca
gctgtagttcactacaatgggaattacaagccatggttggatttggctgttgccaagtac
aagccttactggtctagatatgtacagtatgataacccttatcttcaacaatgcaacatt
gttgaagaatga
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