KEGG   Populus trichocarpa (black cottonwood): 18098191
Entry
18098191          CDS       T01077                                 
Name
(RefSeq) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic
  KO
K03526  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop00900  Terpenoid backbone biosynthesis
pop01100  Metabolic pathways
pop01110  Biosynthesis of secondary metabolites
Module
pop_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:pop00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    18098191
Enzymes [BR:pop01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.7  With an iron-sulfur protein as acceptor
    1.17.7.1  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin)
     18098191
    1.17.7.3  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin)
     18098191
SSDB
Motif
Pfam: GcpE Sgf11 DUF7575 Zn_ribbon_9
Other DBs
NCBI-GeneID: 18098191
NCBI-ProteinID: XP_052308316
LinkDB
Position
4:complement(21687843..21694459)
AA seq 740 aa
MATGAVPASFSGLKMRESSLGFGKSVDFVRICDIKRIKSGRKRISMIQNSNTGPGIVELQ
PASEGSPLLVPRKKYCESINKTVRRKTRTVLVGNVPLGSEHPVRVQTMTTTDTKDVAATV
EQVMRIADKGADIVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC
FDKIRVNPGNFADRRAQFEKLEYTEDDYEKELEHIEKVFTPLVEKCKKYGRAMRIGTNHG
SLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVVMVQAYRLLVAEMY
VQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLA
NLGMRAAEIQQGVAPFEEKHRHYFDFQRRSGQLPVQKEGEEVDYRGVLHRDGSVLMSVSL
DQLKAPELLYKSLAAKIVVGMPFKDLATVDSIFLRELPPVDDNDARLALKRLIEVSMGVI
APLSEQLTKPLPNAMVLVNLKELSTGAYKLLPEGTRLVVSLRGDEPCEELEILEHVDATM
ILHVLPLSEDKSGRVHAARRLFEYLVDKALSVPVIHHIQFPKGVRRDDLVIGAGTDAGAL
LVDGLGDGVLIEAPDQDFDFLRNTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAE
IREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVRRGIEMEHAT
DALIQLIKDNGRWVDPPAEG
NT seq 2223 nt   +upstreamnt  +downstreamnt
atggcgactggggctgtaccagcatcattttcagggttaaagatgagggaatcaagctta
gggtttggaaaaagcgtggatttcgtgagaatttgtgatataaagaggatcaaatccggt
agaaaaagaatttcaatgattcaaaactctaatactggtcctgggattgttgagcttcaa
cctgcatcagaagggagccctctattagtcccaagaaaaaagtattgtgaatctataaac
aagactgtcagaaggaaaacacgcactgtactggtgggaaatgtgcctcttggtagtgag
catcctgtaagggttcaaactatgaccacaactgacaccaaggatgttgctgcgacagtt
gaacaggtgatgagaatagcagacaagggagcagatatagttcgtataacagttcaaggg
aagagagaagccgatgcctgttttgaaatcaaaaactctcttgtgcagaaaaattacaat
attcctctggttgcggatattcatttcgctccatctgttgcattgcgagtagctgaatgc
tttgacaagattcgtgtcaacccaggaaattttgctgataggcgggctcaatttgagaag
ctagagtacacagaagatgactatgagaaagaacttgagcatattgagaaggtttttact
ccattggttgagaaatgtaagaagtatggaagggcaatgcgtattggaacaaaccatggg
agtctttcagatcgtataatgagctactatggagattctcctaggggaatggttgaatct
gcatttgagtttgctaggatatgtcggaagttggacttccataattttgtcttttcaatg
aaagcaagcaacccagttgtcatggtccaggcataccgtctacttgtagcggaaatgtat
gttcaaggttgggattatccattacacttgggcgtcactgaagctggagaaggtgaagat
gggcggatgaaatctgcaattggcattgggactcttcttcaggatggtttgggtgataca
attagggtttcacttacagaaccaccagaagaggagatagatccctgcagaaggttggcc
aatcttggtatgagagcagccgaaattcagcaaggagtggcaccatttgaggaaaagcac
aggcattactttgatttccagcgccgatctggtcaattgccagtgcaaaaggagggtgag
gaggtggattatagaggtgtcctgcaccgtgatggctccgtgctcatgtcagtctcttta
gatcagttgaaggcacccgaacttctctataagtcacttgcagcaaagattgttgttggg
atgccttttaaggatctggcaacagttgactcaatatttttgagagagctcccaccagtg
gatgataacgatgctcggctagctctcaaaaggttgatagaagttagtatgggagtaata
gctcctttatcagagcagctaacgaagccattacccaatgccatggttctagtcaacctt
aaggagttgtctactggtgcatacaagcttttgccagaaggtacacgcttggttgtgtct
ttacgtggcgatgagccctgtgaagaattggaaattctcgaacatgttgatgccacaatg
attcttcatgttctacccctttcagaggataagagtggcagagtgcatgcagcaaggaga
ttatttgagtatctcgtagacaaggctttgagtgtccctgtgattcaccatattcaattt
ccaaaaggggttcgcagggatgacctggtcattggtgctggtacagatgctggagctctt
ttagtagatggtctaggagatggtgtccttattgaagccccagaccaggattttgatttt
ctcaggaatacatctttcaacttactacaaggttgcagaatgagaaatacaaagacggaa
tatgtctcatgcccttcatgcggaagaactttgtttgatcttcaagagataagtgcagaa
atacgagaaaagacatcacacttgcctggtgtctcgatcgcaatcatgggttgcattgtg
aatggccctggggagatggctgatgcagattttgggtacgtcggtggtgctcctggaaag
attgacctttatgttggaaagacggtggtcaggcgtggaattgaaatggagcatgccact
gacgccttgatccagctgattaaagataatggccgctgggtagatcctcctgctgaaggg
taa

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