Populus trichocarpa (black cottonwood): 18098323
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Entry
18098323 CDS
T01077
Name
(RefSeq) stromal 70 kDa heat shock-related protein, chloroplastic
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03040
Spliceosome
pop04141
Protein processing in endoplasmic reticulum
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18098323
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
18098323
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
18098323
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pop01009
]
18098323
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
18098323
03009 Ribosome biogenesis [BR:
pop03009
]
18098323
03110 Chaperones and folding catalysts [BR:
pop03110
]
18098323
04131 Membrane trafficking [BR:
pop04131
]
18098323
03051 Proteasome [BR:
pop03051
]
18098323
03029 Mitochondrial biogenesis [BR:
pop03029
]
18098323
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
18098323
Protein phosphatases and associated proteins [BR:
pop01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
18098323
Spliceosome [BR:
pop03041
]
Complex B
Other components
Prp19 complex
18098323
Complex C
Prp19-CDC5 complex
18098323
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
18098323
Chaperones and folding catalysts [BR:
pop03110
]
Heat shock proteins
HSP70 / DNAK
18098323
Membrane trafficking [BR:
pop04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
18098323
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
18098323
Proteasome [BR:
pop03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
18098323
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
18098323
Exosome [BR:
pop04147
]
Exosomal proteins
Proteins found in most exosomes
18098323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
ParM_N
FtsA
Hydantoinase_A
FGGY_C
PilM_2
DUF5398
Motif
Other DBs
NCBI-GeneID:
18098323
NCBI-ProteinID:
XP_024455088
LinkDB
All DBs
Position
4:22906871..22910946
Genome browser
AA seq
705 aa
AA seq
DB search
MASSAAQIHGLGVGGGIGSTSSRKPTFSFAPRSVFFGQNLRKTTVTFLKHTNNTSRRRYS
TGPVRIVNEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNGDRLVGQI
AKRQAVVNPENTFFSVKRFIGRKMSEVDEESKQVSYKVVRDENGNVKLECPAIGKQFAAE
EISAQVLRKLVDDASKFLNDKVTKAVVTVPAYFNDSQRTATKDAGRIAGLEVLRIINEPT
AASLAYGFERKSNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRVVD
WLAGSFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIET
TLTRAKFEELCSDLLDRLKTPVENSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKLTG
KDPNVTVNPDEVVALGAAVQAGVLAGDVSDIVLLDVSPLSLGLETLGGVMTKIIPRNTTL
PTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDI
DANGILSVAAIDKGTGKKQDITITGASTLPSDEVGRMVSEAEKFAKEDKEKRDAIDTKNQ
ADSVVYQTEKQLKELGEKVPAPVKEKVEAKLQELKDAVAGGSTQGMKDAMAALNQEVMQL
GQSLYNQPGAAPGAGPAPGSEAGPSDSSNKGPDGDVIDADFTDSK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcagctgcccagattcatggtcttggtgttggtggtgggattggtagcaca
tcttcaagaaaacccaccttttcttttgcaccaagatcagtgttttttggccaaaacctt
agaaaaaccacagttacgttcttaaaacatacgaataacacttcaagaagaaggtatagt
accgggccggttaggatagtgaatgagaaagttgtagggattgatctggggacaaccaat
tcggcggtggcggcgatggaaggagggaaacccacgatagttacaaacgcggaggggcag
aggactaccccatctgttgtggcgtatacaaaaaatggggataggcttgtggggcagatt
gccaaaaggcaagcggtggtgaaccctgagaataccttcttttcggtgaagaggtttatt
gggaggaagatgagtgaagtagatgaagagtctaaacaggtttcgtataaggttgtgagg
gatgagaatggaaatgtaaaattggagtgtcctgctattgggaaacagtttgctgctgaa
gagatttcagctcaggttttgaggaaacttgtggatgatgcttcaaaattcttgaatgac
aaagtgaccaaagcagttgttactgtgcctgcgtacttcaatgattcccaaaggacagcc
acaaaggatgctggtcgcattgctgggttggaagttcttcgaatcatcaatgaacctact
gctgcatcgttagcatatggatttgaaaggaagagcaacgaaaccatcctagtatttgac
cttggtggtggtacttttgatgtttcagtgcttgaggttggtgatggagtgtttgaagtt
ctttctacttcaggagatacacatttggggggtgatgatttcgacaagagagttgttgat
tggcttgctggtagctttaaaagagacgaaggtattgatcttttgaaggataaacaagca
cttcagcggctaactgagacagccgagaaagctaagatggagctgtcttctttgacccag
acaaacatcagtttacctttcatcactgctactgcagatggccccaagcacattgagacc
accctgacaagggccaagttcgaggaattatgttctgatctgcttgacaggcttaaaact
ccagttgagaattccttgagggatgccaaactgtcctttaaggatctagatgaagtgatc
cttgttggtggatcaacacgtattccagctgtacaggagcttgtaaagaagttgactgga
aaagaccccaatgtcactgtcaatccagatgaagttgttgcccttggtgctgcagttcag
gctggtgtcttggctggagatgtcagtgacatcgtgctgctggatgtgtctccgttatct
cttggtctggagactctaggaggggttatgacaaaaatcatcccaagaaacactactctt
ccaacctccaaatcagaggtgttctcaactgctgctgatggacagacaagtgtagaaatt
aatgttctccagggtgaaagagagtttgtgagggacaacaaatctcttggcagcttccgc
ctagatggtatcccaccagctccacgaggagttcctcaaatcgaagtgaaatttgatatt
gatgccaatggtattctctccgtcgctgctattgacaagggcacagggaagaagcaagac
atcaccattactggtgctagcaccttacccagtgatgaggttgggaggatggtcagcgaa
gctgagaagtttgcaaaggaggacaaggagaagagagatgccattgacacaaagaaccag
gccgattctgttgtctaccagaccgagaagcagcttaaagagctaggggagaaggttcca
gcccctgtcaaggagaaggttgaggcaaaactccaagagctcaaggatgcagttgcaggt
ggatcaactcaagggatgaaggatgccatggctgcccttaatcaagaagtcatgcaactt
ggccagtccctttacaatcagccaggtgcagcgcccggcgctggccctgcccctggcagt
gaagctggaccctcagattcatcaaacaagggacctgacggggatgtcatcgatgcagat
ttcacagatagcaaatga
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