Populus trichocarpa (black cottonwood): 18098335
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Entry
18098335 CDS
T01077
Name
(RefSeq) KH domain-containing protein At1g09660/At1g09670
KO
K14945
protein quaking
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
18098335
Spliceosome [BR:
pop03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
18098335
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GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
STAR_dimer
KH_1
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
18098335
NCBI-ProteinID:
XP_006385053
UniProt:
B9N0F3
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All DBs
Position
4:23003177..23011919
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AA seq
294 aa
AA seq
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MGERIPPGSYFQYPPSGVHHASPHRSTSLPSDLERYLAELFAEKHKLGPFVQVLPNCCRL
LNQEIRRASACNQGLVDHERYEHESPFRSLGQHSNGRTMDLEAWSAMPTEENGHLQRMAS
FPAASMGWPGVPGIPITPVVKRVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVEALTDCR
VYIRGKGSVKDSLKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINARLEHAITILESLLK
PVDESLDHYKKQQLRELALLNGTLREESPSMSPSMSPSMSPFNTAGMKRAKTGR
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgggagagagaatcccacctgggagttacttccagtaccctccctctggagtccatcat
gcttctcctcacaggtccacttctttgccttcagatcttgaaagatatttggccgagtta
ttcgcagagaagcacaagttggggccatttgtgcaagttttaccaaattgctgcaggctt
cttaatcaagaaatcagaagggcatcagcttgcaatcagggtttggtagatcatgaaaga
tacgagcatgagagtccatttaggtcattaggtcaacattcaaatggaagaacgatggat
ttggaggcatggtctgctatgccaactgaggagaatgggcatcttcaaagaatggcctca
tttccagctgcttcaatgggttggcctggggtccctggaattccaatcacgcctgttgta
aagagagtaattagacttgatgttcctgttgataaatacccaagttataattttgttggc
cgaatcttgggaccacgagggaactccttgaaaagagttgaagccttgacagattgtagg
gtgtatataagaggcaagggctccgtaaaggattctctaaaggaagaaaaactaaaagac
aagcctggatatgagcaccttaatgaaccgctgcatgtgttggtggaggctgaatttcca
gaggatataataaatgcccgcctggaacatgcaataaccatattagaaagcctcctgaag
cctgtggacgaatccttggatcactataagaaacagcaattgagggaactggctttgcta
aatggtactctaagggaggaaagtccaagcatgagccctagcatgagcccaagcatgtca
cccttcaatactgccggaatgaaacgagccaagacaggaagatga
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