Populus trichocarpa (black cottonwood): 18098340
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Entry
18098340 CDS
T01077
Name
(RefSeq) LOW QUALITY PROTEIN: ras-related protein RABA2a
KO
K07904
Ras-related protein Rab-11A
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
18098340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
18098340
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
18098340
04031 GTP-binding proteins [BR:
pop04031
]
18098340
Membrane trafficking [BR:
pop04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
18098340
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
18098340
Exosomal proteins of colorectal cancer cells
18098340
GTP-binding proteins [BR:
pop04031
]
Small (monomeric) G-proteins
Rab Family
Rab11/25 [OT]
18098340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
RsgA_GTPase
DLIC
YtzH
Motif
Other DBs
NCBI-GeneID:
18098340
NCBI-ProteinID:
XP_024455064
LinkDB
All DBs
Position
4:23031962..23037030
Genome browser
AA seq
215 aa
AA seq
DB search
MARRADEEYDYLFKVVLIGDSGVGXSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI
MLIGNKTDLKHLRAVATEDAQSYAEKEGLAFIETSALEATNVEKAFQTILSEIYRIVSKK
SLSSEESAPASIKDGKTIVVGGPEPDTKKTCCSSS
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggagagcagacgaggaatacgactacctgttcaaggtagtattaatcggcgac
tcaggagtagganaatcgaacctcctctcccgatttactcgcaacgagttctgtttggag
tccaagtccaccattggcgtcgaattcgctactcgcactcttcaagttgaaggaaggact
gtgaaagctcagatatgggacacagctggacaggagcgatacagagcaatcaccagtgcc
tactataggggtgcccttggagctcttcttgtatatgatgttacaaagccaacaacattt
gaaaatgtgagtcggtggctgaaggagctgagggatcatgcggattccaatattgtgatc
atgttaattgggaacaagactgatctgaaacatcttcgagcggttgccaccgaggatgct
caaagttatgcagagaaagaagggcttgcatttatagagacatccgctctcgaagcaaca
aatgttgagaaggctttccagacaattctttcagagatatataggatagttagtaagaag
tcactttcttcagaagagtcagcacctgctagtatcaaagacgggaagacaattgtagtt
ggaggacctgagcccgacactaaaaagacttgctgctcttcatcctga
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