Populus trichocarpa (black cottonwood): 18098358
Help
Entry
18098358 CDS
T01077
Name
(RefSeq) dynamin-2A isoform X1
KO
K01528
dynamin 1/3 [EC:
3.6.5.5
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04144
Endocytosis
pop05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
18098358
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
18098358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
18098358
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
18098358
Enzymes [BR:
pop01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
18098358
Membrane trafficking [BR:
pop04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
18098358
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
18098358
RhoA-dependent endocytosis
18098358
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
18098358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_N
Dynamin_M
GED
PH
PH_8
MMR_HSR1
PH_11
GTP_EFTU
ARGLU
AIG1
PH_20
AAA_16
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
18098358
NCBI-ProteinID:
XP_006385078
UniProt:
U5GH95
LinkDB
All DBs
Position
4:23147256..23157571
Genome browser
AA seq
920 aa
AA seq
DB search
MEAIDELAQLSESMRQASALLADEDIDETTSSSSSSRRSSTFLNVVALGNVGAGKSAVLN
SLIGHPVLPTGENGATRAPISIELSRDSSVSSKSIILQIDSKNQQVSASALRHSLQERLS
KGSSGRSRDEIYLKLRTSTAPPLKLIDLPGVDQRIVDDSMISDYVQHNDAILLVVIPATQ
APEISSSRALRIAKEYDAESTRTVGVISKIDQAATESKALAAVQALLLNQGPPKTSDIPW
VALIGQSVSIASAQSASAPENSLETAWRAESESLKSILTGAPPSKLGRVALVDALAGQIR
SRMKLRLPNLLSGLQGKSQIVQDELVGLGEQMVSSSEGTRALALELCREFEDKFLLHLMG
GEGNGWKVVASFEGNFPNRIKQLPLDRHFDINNVKRIVLEADGYQPYLISPEKGLRSLIK
GVLELAKEPSKLCVDEVHRVLVDIVSSAANATPGLGRYPPFKREVVAIASSALDGFKNEA
KKMVVALVDMERAFVPPQHFIRLVQRRMDRQRREDELKNKSSKKAVDAEQSILNRATSPQ
TGVQQSGGSLKSMKDKSNQQDKDAQEGSALKTAGPGGEITAGFLLKKSGKTNGWSKRWFV
LNEKSGKLGYTKKQEERHFRGVITLEECNIEEVSEEEETPSKSSKDKKANGPSSEKGPSL
VFKITSRVQYKTVLKAHSAVVLKAESVADKVEWLNKLRNVIQSKGGQVIGESGPPMRHSM
SDGSLDTIARRPADPEEELRWMSQEVRGYVEAVLNSLGANVPKAVVLCQVEKAKEDMLNQ
LYSSISAQSTARIEELLQEDQNAKRRRERYQKQSSLLSNLTRKLSIHDNRAAAASNWSDG
GGGGAESSPRTNGPSSGEDWRNAFDAAANGPADSFGGPSRSHSRRNSDPAQNGDVNSNSS
RRTPTRMPPVPPPSGSSYRY
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgatcgatgaattggctcagctatcggaatctatgaggcaagcatctgccttg
ctcgccgatgaagatatcgatgaaacgacgtcgtcgtcttcttcttctcgacgctcctcc
actttcctcaatgtcgttgctctcggcaatgtcggcgccggcaaatctgctgttttgaat
agtttaatcggacatcctgttttgccaactggtgaaaatggtgctacccgggctccgata
agcatcgagctaagtagggatagttctgtaagcagtaaatcgattattttgcaaattgac
agcaaaaatcaacaggtttctgcgagtgcgcttcggcattctctacaggaaaggctaagt
aaaggttcctcaggcaggagtcgtgatgaaatatatctgaaacttcgtaccagtacagcc
ccaccattgaaattgattgacttgcctggggtggatcaaagaattgtagatgactcgatg
atcagtgattatgttcagcacaatgatgctattctgctagttgtaatacctgctactcag
gcaccagaaatttcttcttctagagccctcagaatcgcaaaggaatatgatgcagagagt
accagaacagttggtgttattagtaaaattgatcaagcagctacagagtcaaaagctctt
gcagctgttcaagctcttcttttgaatcagggaccaccaaaaacatctgatattccatgg
gttgcattgattggtcaatctgtttccattgcttcagcccaatcagcaagtgcacctgag
aactctttggaaactgcttggcgagctgaaagtgaaagtctaaaatccatattgactgga
gccccaccaagcaagcttgggagagttgctctagtggatgcccttgctggtcagatccgt
agtcgcatgaaactcaggcttcccaatctcctttctgggcttcaggggaaatctcaaata
gttcaggatgaattggtggggcttggggagcaaatggttagttcttctgaaggtacaaga
gctttagctttggagctctgccgtgagtttgaggacaaatttcttctgcatcttatgggt
ggtgaaggtaatggttggaaagttgttgcgagttttgagggtaattttccaaacagaatc
aagcagctacctttagataggcattttgacataaacaatgtcaaacggattgtcctagaa
gccgatggttatcaaccatatcttatatctccagagaaggggttaaggtccttaataaaa
ggtgtccttgagctggcaaaggaaccctcaaagctatgtgttgatgaggtgcatcgtgta
ctagtggatatagtatcttctgctgcaaatgctactcctggtcttggaaggtatcctcct
ttcaagagagaggttgttgccattgcaagttctgcacttgatgggtttaaaaatgaagct
aagaaaatggtagttgccctagttgatatggagcgtgcatttgttccacctcaacacttc
atccgattggtgcagaggcgaatggataggcagcgccgtgaggatgagctaaagaacaaa
tcttcaaaaaaggcagttgatgcagagcaatctattttaaatagggcaaccagcccccag
acaggtgttcaacaatctggaggaagcttgaaatcaatgaaagataaatccaatcagcag
gataaagatgcacaagagggatctgccttgaaaactgctgggcctggtggtgagataaca
gcagggtttttgttgaagaaaagtggaaaaactaatggctggagtaagcgttggtttgtt
ttgaatgaaaaaagtggcaagcttggttacaccaaaaagcaagaagaaagacacttccgt
ggggttattactttggaggaatgcaatattgaagaagtttctgaagaagaagaaacccca
tcaaaaagttccaaggataaaaaggcaaatggaccaagttctgagaaaggacctagtctt
gtgttcaaaataactagtagagttcaatataagactgtcttgaaagctcacagcgctgtt
gtattaaaagctgagagcgtggctgataaggttgagtggctaaacaagttgagaaatgtc
atccagtctaaaggaggccaagtgattggtgaatctgggcctcccatgcgtcatagcatg
tctgatggttccctagatacaatcgctagaagacctgctgaccctgaagaagagctccgg
tggatgtcacaagaagtacgcggctatgttgaagctgttcttaacagccttggtgccaat
gtcccaaaagcagttgttctttgccaagtagagaaagccaaagaagacatgcttaatcaa
ttatatagctctataagtgcacaaagcacagcaaggattgaggagctgctccaggaggac
cagaatgcaaagaggaggagagaacgctatcagaaacagtcctctcttctttcaaatctc
actaggaaacttagcatccatgataatcgagcagctgctgcttccaactggtctgatggt
gggggtggtggagcagaaagcagcccaagaacaaatggaccatcatcaggagaagactgg
agaaatgcatttgatgcggcagccaatggacctgccgacagttttggtggcccatcgagg
tctcacagccggcgaaacagtgatccagctcagaatggtgatgtaaactcaaacagcagt
cgccgcacacccactcgaatgccacccgtgccaccaccgtctggttcatcctataggtac
tag
DBGET
integrated database retrieval system
