Populus trichocarpa (black cottonwood): 18098366
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Entry
18098366 CDS
T01077
Name
(RefSeq) mitotic spindle checkpoint protein MAD1 isoform X2
KO
K06679
mitotic spindle assembly checkpoint protein MAD1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
18098366
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Core SAC proteins
18098366
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MAD
AAA_24
Motif
Other DBs
NCBI-GeneID:
18098366
NCBI-ProteinID:
XP_006385088
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Position
4:23217711..23226402
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AA seq
682 aa
AA seq
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MILRTPPEKRTRGGVADSNAIPIIESPQSDHHHNVINEDNNISPLQPSSPEQLLCTYQCR
QLVKSDFIDALSSAEKQARDYQSKLEGINENFTKSEDEKKFRDKLLQAEQELAAAKGREQ
ALQNQLAKEVNDNQERFKKQLESQSKLEVNLENEKNLRQKAESSAASAEEKASVLEGKLS
HLSESIEREKKRPNTELEQMNREPEHSVSRISAELEKMECRAQHAEKESELLKEQLEDLR
RQLTEESEVREARKLRSSHENIELLKEKLFEEKGWRERAESELSKLLEFELNMKKLEDEL
SSWKSVIKDIPGVLCYDDIPAKFAALQKEVIDNMMKVGEANALLKQMEVALDTAQLGKQN
AETEAALTKEMAEALKLEVKEIELMLSMVTEERDRLKNVVNELKRPKDNRRGDATASGVL
QELESSLANKVFCIQELENNLHAQKEVNNRQLEEIKTLNDMLNNEARRIKSLERESDRLR
AEISLLESKLGHGDFSAANTKVLRMFNTLAVDSEAKQSIEALRTELKKTKEKLQAVEELK
SQSGDTGKLVDSYISGKITQLKEQIATLEKREERYKTVFADRISVFRRACCELFGYKIVM
DEHQRSNGIPVTRFTLQSVYAQSDDEKLEFEYESGNTNILVNDYTSQPDISRQADIFIRK
MNSIPAFTANLTVESFNRRTLS
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgatacttagaactccaccagagaagcggacaagaggaggagtcgccgactcaaatgca
atacctatcatcgagagccctcaatcggaccaccaccataacgtcatcaacgaagacaac
aacatttcgccgctccaaccttcctcccccgaacaactcctctgcacctaccagtgccgc
caattggttaaatcggattttatagacgcgttgagtagtgccgagaagcaagctcgcgat
taccagtctaaattagagggaatcaatgaaaatttcacgaagtctgaagacgagaagaag
tttcgagataaattgttacaggcagagcaagaacttgctgctgctaaaggacgcgaacaa
gctcttcaaaatcaacttgctaaggaagttaatgataaccaagaaaggttcaagaaacag
ttagaatcacaaagtaaacttgaggttaaccttgaaaatgagaagaaccttcgccagaaa
gctgaatcctcagcagcttctgctgaagagaaagcaagtgttttagagggaaaacttagc
catctttctgaaagcatagaaagggagaaaaagcgccccaatactgagcttgaacagatg
aatagagaaccggagcattctgtttctagaataagcgcagaactagaaaaaatggaatgc
agggctcaacatgctgagaaagaatcagagctactgaaggagcagctagaagatctgaga
aggcaacttactgaggagtctgaagtgagagaagcaagaaagctaagatcttctcatgaa
aacatcgagttgttgaaggaaaaattatttgaagaaaaaggatggagagaaagagcagaa
tcagagctatctaagttactagaatttgagttaaatatgaagaagctggaggatgagttg
tcttcttggaagtcggtgataaaggatatccctggggtgttgtgctatgacgatatacct
gctaagtttgcagctttacagaaagaggttattgacaacatgatgaaggtaggtgaggca
aatgcacttttgaaacaaatggaggtggccttggacactgcccaacttggtaaacaaaat
gctgaaactgaggctgcattgactaaagagatggcagaagctttgaaattggaggtcaag
gagattgaattgatgctctctatggttaccgaagagagagataggttgaaaaatgttgtt
aatgaattgaagaggccaaaggacaatcgaagaggggatgcaacagccagtggagttctt
caggagcttgaatcatctcttgcaaataaggtattttgtattcaagaattggagaataat
ttacatgcacaaaaagaagtcaataatcgccaattggaagaaataaagacactcaatgac
atgctaaataatgaagctagaagaattaagtcattggaaagggagagtgatcggcttcgt
gcagagatctccctgttggagtctaagctagggcatggtgacttctctgctgcaaatacg
aaagtactgagaatgtttaatacgcttgcagttgatagtgaggccaaacaatctattgag
gctttacgaactgagttgaagaagacaaaggagaagttacaagctgtagaagaattgaag
agtcagtcaggtgatacgggcaagctggtggactcctatatctctgggaagataacacaa
ttaaaagaacaaattgcaactcttgaaaagcgtgaagaaagatacaagacagtttttgct
gatagaatctctgtgtttcggagggcatgttgtgaactttttggctacaagattgtaatg
gatgaacatcagcgttctaatggaataccagttactcggtttaccctgcaatctgtgtat
gctcaaagtgatgatgagaaacttgagtttgaatatgaatcagggaatacaaacattttg
gtaaatgattacacatcgcagcccgacatatctcgtcaggctgatatatttattcggaag
atgaactcaatcccagctttcacagccaacttaacagtggagtctttcaacagacgaact
ctatcgtaa
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