KEGG   Populus trichocarpa (black cottonwood): 18098422
Entry
18098422          CDS       T01077                                 
Name
(RefSeq) decapping 5-like protein
  KO
K18749  protein LSM14
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pop03019]
    18098422
Messenger RNA biogenesis [BR:pop03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     18098422
SSDB
Motif
Pfam: LSM14 FDF SM-ATX TrmO_C
Other DBs
NCBI-GeneID: 18098422
NCBI-ProteinID: XP_006385151
UniProt: B9N0P5
LinkDB
Position
4:complement(23956337..23959775)
AA seq 529 aa
MASSSSSSSSKAGESYIGSLISITSKYEIRYEGVLYHINPQDATIGLKNVRSYGTEGRKK
DGPQIAPSDKVYEYILFRGSDIKDLQVQSPPPDQTEEQIYNDPAIIQNHSALSSSTAAGV
QAQHTPALTTRAYSGALPLFQPVNHVGLTNLSQATQNAGPSLSIPKHSQGYHGISSQQSM
VSSPLIVQNHMQALGLQEPPVMGLKSPSECITPESTVATNPFNPIFSSSLSPVQYATSPD
TSSFLSLKTPVPSHAASLPANRLTMSSIPMTSIPMSSQDINTTETLAVADPMAMRPAQSL
PYLMPSYVGSTSSSVLTPLPSLLSPHHFLQSRPPVLSSPQKLYPDQKDVAALTPLSSTSP
PLLSTPASQPPLLPLPGSVQQHKYLTSKFTEEFDFEAMNEKFKKDEVWGYLGKAKQREKT
EGMEDNTTDQSMVDKEAPVVVLNLDPKPAYKKDEFFDTISCNIRNQRWNGQNCFSERMKL
DTETFGNLHLRPNLGYGGIGSGRGDTYHTSRGRGRGYGYRGRGRGYIGF
NT seq 1590 nt   +upstreamnt  +downstreamnt
atggcgtcgtcctcttcttcgtcgtcttcaaaagctggagaatcgtacataggaagccta
attagcatcacttctaagtacgagattcgctacgaaggtgttctttatcacatcaatcca
caagacgccaccattggcctaaaaaacgtgaggtcttacggaacagagggtcgtaagaag
gatggaccacaaattgcccctagtgataaggtgtatgaatatattctatttcgtggaagt
gatattaaggatttgcaagtgcagtccccacctcctgaccaaacagaggaacagatttac
aatgaccctgctatcatccagaaccattctgctttaagttcttcaactgcagctggtgtt
caggcacaacatacgcctgctttgacgaccagagcctattctggtgcattgcctttgttt
cagcctgtaaatcatgttggcttaacaaatctttcccaggctactcaaaatgctggtcca
tctctttccattccaaagcattcacaaggataccatggaatatcttcccagcagtctatg
gtttcatctcccttaatagttcagaatcatatgcaggctcttggattgcaggaacctcca
gttatgggattgaaaagtccttcagaatgtattactcctgaatcaactgttgcaactaat
ccatttaatccaatcttttcatcttccctttcaccggtacagtatgcgacttctcctgac
acatcatccttcttatctctgaagacacctgttccatctcatgctgcatctcttcctgct
aatagattaaccatgtcttcgattcccatgacttcgattcccatgtctagtcaagacatc
aacacaactgaaactctagctgttgcggaccccatggctatgcgtcctgcccaatctttg
ccttacctcatgccatcctatgttggttctacttctagctctgtgttaacaccacttcca
tctcttttaagtcctcatcacttcttacagtctaggccacccgtgctttcttccccacag
aagctgtaccctgaccagaaagatgtagctgctctgactcctttatcatctacttctcca
cccttgctttctactccagcatctcaaccaccattattacctttgccaggttctgtacaa
cagcataaatacttgacctcaaaatttacagaagaattcgattttgaagccatgaatgag
aagtttaaaaaagatgaggtttggggttatcttggaaaggcaaagcaaagagagaaaact
gaaggcatggaggataacacaactgatcaaagcatggtggacaaagaggcccctgttgtg
gttcttaatctcgatcctaagcctgcctacaagaaggatgaattctttgatacaatttct
tgcaacatccgcaatcagcggtggaatgggcagaactgtttctctgagcgaatgaagctg
gatactgagacttttggcaacttgcatctcagacctaatttgggttatggaggcatcggt
tctggacgtggtgatacctatcacacctcacgtggtcggggaaggggatatggttatcgt
gggagggggcgtgggtacattggattctga

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