Populus trichocarpa (black cottonwood): 18098640
Help
Entry
18098640 CDS
T01077
Name
(RefSeq) probable pectinesterase/pectinesterase inhibitor 21
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00040
Pentose and glucuronate interconversions
pop01100
Metabolic pathways
Module
pop_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
18098640
Enzymes [BR:
pop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
18098640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
PMEI
Tweety
Motif
Other DBs
NCBI-GeneID:
18098640
NCBI-ProteinID:
XP_006382447
UniProt:
B9N4L3
LinkDB
All DBs
Position
5:1457193..1459363
Genome browser
AA seq
578 aa
AA seq
DB search
MSYGDDSNRKRRIAVIGISSFLLVAMVVAVSVGVGLGNDGNEDLNDSNHKSTNQVSASMK
AVKAICQPTDYRKTCEENLQKAAGNTTDPRELIKMAFKIAEKHVNEASKKSKVLEELSKD
PRTRGALQSCRELMTMSVDELKQSLNKVTDFDITEIEKLMADVKTWLSASITYQETCLDG
FQNTTTNAGKEMKKGLKLSMELSANLLAIVSGISSAIPSLESLGQRRLLQDDLPVLGHGD
QIFPTWTDFGKRRLLAAPASKIKADIVVAKDGSGDFSTIRDALHHVPIKSSKTFVLYIKA
GIYQEYIDFNKSMTNLMVIGDGRETTRIVGNKNFVDGINTYHTATVVVLGDNFVAKNIGF
ENNAGAIKHQAVALRVSADYALFYNCSMDGHQDTMYTHAKRQFYRDCSISGTIDFVFGDA
SAVFQNCKFLIRKPLENQQCIVTAQGRKMRRQPSAIIIQNSTITAHPDLFPERKLFKSYL
GRPWKEFSRTIIMESFIDDVIQPEGWLPWLGTFGLKTCWYTEFNNNGPGSSKAARVKWNG
IKTIDRQHALDFTPGRFFKGGAWIKTTGIPYTPFLARK
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatggggatgattcaaacagaaagaggagaatagccgttatcggcatctcttct
ttcctcttggtagctatggttgtagctgtctccgttggcgtcggtcttgggaatgacggc
aatgaggacctcaatgacagcaatcataaaagcactaatcaagtatctgcctccatgaaa
gccgtcaaggccatttgccagcccacagattacaggaaaacatgtgaagaaaacctccaa
aaagctgctggaaacaccacagatcctagagaattgatcaagatggcattcaagattgca
gagaagcacgttaatgaggcttccaagaaatcaaaggttttggaggaactctcaaaggac
ccaagaacccgtggggcccttcagagctgcagagagcttatgaccatgtcggttgatgag
ctcaagcaatctcttaacaaagtaacagattttgatattaccgagatagaaaaattgatg
gcagatgttaagacttggcttagtgcttccatcacatatcaagaaacttgcttggacgga
ttccaaaacacaaccactaatgctggaaaggaaatgaagaagggattgaagctttccatg
gagcttagcgccaatctccttgccatcgtttccgggatctcttccgcaatcccttcattg
gaaagtttgggccagcgccgccttctccaagatgatttacctgttcttggacatggtgat
caaatattccccacctggactgactttggaaagcgcagacttctggcagcgcctgcttcc
aagattaaggctgacattgttgtggctaaggatggaagtggagatttctcaacaatcaga
gacgcattgcatcatgttcccattaagagcagcaagacctttgtgttatacatcaaggca
ggaatttatcaggagtacattgatttcaataagagcatgactaatttgatggtgattgga
gatggcagggagactactcgcatcgtcggaaacaagaacttcgtcgatggaatcaacacc
tatcacaccgcaacagtcgttgtcctcggagataactttgtggccaagaatattggtttc
gagaacaatgctggtgccatcaaacatcaagctgtggcattgagagtttcggctgattat
gctctcttctacaactgctcaatggacggacaccaggacacaatgtacacacacgccaag
cgtcaattctaccgcgactgcagcatctccggcaccatcgacttcgtctttggtgacgct
tctgcagtcttccaaaactgcaaattcttgatccgcaagccattggaaaaccaacagtgc
attgtgacagctcaaggcaggaaaatgaggaggcaaccatcagctattatcatccaaaac
agcacaatcacagcccatcctgacctattccctgaaaggaaactattcaagtcatatctc
ggccgtccatggaaggaattctcaagaacaatcatcatggaatccttcattgacgatgtc
atccagcccgaaggatggctaccttggctcggaactttcggactcaagacttgttggtac
acagaattcaacaacaatggtcctggttctagcaaggcagctcgtgtgaagtggaatggt
atcaagaccatcgatcgtcaacacgccttggatttcacaccaggaaggttcttcaagggc
ggtgcctggatcaagactaccggaatcccctacacacctttcttggccagaaaatga
DBGET
integrated database retrieval system
