Populus trichocarpa (black cottonwood): 18098667
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Entry
18098667 CDS
T01077
Name
(RefSeq) 26S proteasome regulatory subunit 6A homolog
KO
K03065
26S proteasome regulatory subunit T5
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
18098667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pop03051
]
18098667
Proteasome [BR:
pop03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
18098667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_5
nSTAND3
AAA_16
AAA_2
RuvB_N
AAA_22
DUF815
AAA_14
AAA_7
Mg_chelatase
Parvo_NS1
AAA_24
TIP49
AAA_33
PhoH
ATPase
AAA_19
IstB_IS21
RNA_helicase
AAA_28
AAA_25
TsaE
AAA_11
Motif
Other DBs
NCBI-GeneID:
18098667
NCBI-ProteinID:
XP_006382479
UniProt:
B9N4I9
LinkDB
All DBs
Position
5:complement(1590409..1594498)
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AA seq
423 aa
AA seq
DB search
MATPMAEDSSFEDDQLASMTTEDIIRGSRLVDNEIRILKEEVQRTNLELDSYKEKIKENQ
EKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV
VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ
ELVEAIVLPMTHKERFQKLGIRPPKGILLYGPPGTGKTLMARACAAQTNATFLKLAGPQL
VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
LDGFSSDDSIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH
PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLN
YYA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccccaatggcggaggattcgagcttcgaagatgaccagcttgcctccatgact
actgaagatatcataagaggttctcgtcttgtcgataacgagattcgcattctcaaggaa
gaggtgcagagaacaaatctggagctggattcgtataaggagaagataaaagagaatcaa
gagaagattaaactcaacaagcagctgccttacctagttggcaacattgttgagattttg
gaaatgaacccagaagatgaggctgaagaagacggagcaaacattgaccttgactctcaa
aggaagggtaaatgtgtggtgctgaaaacatcaactcgtcagactatttttcttcctgtg
gttgggcttgttgatcctgacaagttgaagcctggtgacttggttggagtcaacaaagat
agctacttgatcttggatactctaccatcggagtatgattcacgagtgaaggccatggag
gttgatgaaaaaccaacagaagactacaatgatattggaggcttggagaagcagatccaa
gaattagttgaggctattgtactgcctatgactcacaaagagcgatttcagaagttgggt
attcgtcctcccaaaggtatcctcttatatggacctcctggaactgggaaaacattgatg
gcccgtgcttgtgctgcacaaacaaatgccactttcctaaagttggcaggcccacaactt
gttcagatgttcattggagatggtgccaaacttgtccgtgatgccttccagcttgcaaaa
gagaaatctccctgcatcatttttatagatgagattgatgctattggcacaaagcggttt
gacagtgaggttagtggagacagggaagtgcagaggaccatgttagaattgctcaatcag
cttgatggctttagcagcgatgacagcattaaggtgattgctgcaacaaatcgcgctgat
atcctggacccagccctcatgcgatcaggtcgattggatcgcaaaattgaatttccacat
ccaactgaagaagcaagagctcgaatcttgcagatccactcaaggaagatgaacgtccat
cctgatgtgaactttgaagagcttgctcgttccacggatgatttcaatggggcacagcta
aaggcagtttgtgttgaagctgggatgctagcacttcgccgggatgcaactgaggtgaat
catgaggattttaatgaaggtatcatccaagtgcaagcgaagaaaaaagccagccttaac
tattatgcataa
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