Populus trichocarpa (black cottonwood): 18098791
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Entry
18098791 CDS
T01077
Name
(RefSeq) mitochondrial Rho GTPase 1
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pop03029
]
18098791
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
pop04031
]
18098791
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
18098791
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
18098791
GTP-binding proteins [BR:
pop04031
]
Small (monomeric) G-proteins
Rho Family
Miro
18098791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
Ras
EF_assoc_1
Roc
MMR_HSR1
EF-hand_7
EF-hand_6
Dynamin_N
GTP_EFTU
EF-hand_1
SRPRB
ATPase_2
AAA_16
Arf
EF-hand_5
DUF815
Motif
Other DBs
NCBI-GeneID:
18098791
NCBI-ProteinID:
XP_006382604
UniProt:
B9MZU9
LinkDB
All DBs
Position
5:complement(2220148..2227161)
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AA seq
651 aa
AA seq
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MAKAATTANPGVKSGVRIVVAGDRGTGKSSLIVTAISETFPSSVPPVLPPTRMPDDFYPD
RVPITIIDTSSKVEDAGKVAEELKRADAVVLTYACDRPETLDRLSTFWLPELRQLEVKVP
VIVVGCKLDLRDENQQVSLEQVMSPIMQQFREIETCIECSAFKHIQIPEVFYYAQKAVLH
PTGPLFDQESQTLKPRCVRALKRIFILCDLDRDGALSDAELNEFQVKCFNAPLQPSEIIG
VKRVVEEKLPGGGVSGMGVNDCGLTLTGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKL
SDELIPTFKLAPDQSVELTSEAVEYLRNIYELFDSDGDNNLRPAELEDIFSTAPESPWEE
PPYKDAAEKTALGGLSANAFLSEWALMTLLDPSRAVENLIYIGYSGDPSAAVRLTRRRRL
DRKKKQSDRNVFHCFVFGPKKSGKSALVNSFIGRPFYDSYAPTAEEIYAVNVVDLPGGIK
KTLVLREIPDDGVKKLLSNKESLASCDIAVFVYDSSDQSSWKRATELLVDVASHGEDTGY
EVPCLIVAAKDDLNSFPMAIQESTRVSQDMGIEAPIPISSKMGDTNNVFRRIVTAAERPH
LSIPETEAGRSRKQYNRLVNRSLMFVSVGAAVAIVGLAAYRVYAARKNSSG
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagcagcgacgacggccaatcctggagttaaaagtggagtgagaatcgttgtg
gccggagaccgaggcaccggcaagtctagtttgattgtcactgctatctccgaaactttt
ccgtcgagtgttccgccggttcttccacctacacggatgcctgatgatttttaccctgac
cgcgttccaatcaccatcatcgatacctcatctaaagtggaggatgccggtaaagtagct
gaagaattgaagcgagctgatgcagttgttcttacatatgcatgtgacaggccagagact
cttgatcgtttgagtaccttttggcttcctgagcttcgtcaattagaggtgaaggtacca
gttatagtggtgggttgtaagttggatttaagagacgagaaccagcaagtgagcttggag
caagtaatgtcaccaataatgcaacagttccgggagatcgaaacttgtatcgagtgttcg
gcattcaaacatattcagattcctgaggttttctactatgcacaaaaagcagtgcttcac
ccaactggtccattatttgatcaggaatcacaaactttgaagcccaggtgtgttagagcg
ttgaagcgtatattcattctttgtgatcttgatagggatggtgcccttagcgatgccgag
ttaaatgaatttcaggtcaaatgcttcaacgctccattgcaaccttctgagataataggt
gtcaagagggttgtggaagaaaagttgcctggtggaggagtcagtggtatgggcgtcaat
gactgtggccttacactgacaggattcctctttctccatgcattattcatagaaaaaggg
cgccttgagacaacatggactgtacttcggaaatttgggtacaacaacgatatcaaactt
tctgatgaattaattcccacattcaaactagctcctgatcagagtgtagaactcaccagt
gaagctgtcgagtacttgagaaatatctatgaactgtttgacagtgatggtgataacaac
ttgcgacctgcagaactagaagatattttctccactgcaccggaaagcccgtgggaggaa
cctccatataaagatgctgcagagaaaactgcattgggtgggctttcagctaatgctttt
ttgtcagagtgggcccttatgactcttctagatccatctagagctgtggagaatctgatt
tacatcggatattctggtgatccttctgctgctgtccgcttgacaaggagaagacgttta
gatcgcaagaagaaacagtcagacagaaatgttttccattgctttgtctttggaccgaaa
aaatctggaaagtctgcgttagtgaattcttttattggaagacctttttatgatagttat
gctccaactgccgaggaaatttacgcggttaatgttgttgatctacctggtggaataaag
aaaacccttgtgttgagagagattcctgatgatggagttaagaaactcttgtcaaataag
gagtctttggcatcatgcgacatagcagtgtttgtctatgacagttctgatcagtcctcg
tggaagagagcgacagaattgcttgtggatgttgccagccatggtgaggatactggatat
gaggtgccatgcctaattgtggcagctaaagatgatctgaactcatttccaatggcaata
caggaatctaccagggttagtcaggatatgggaatagaggctccaatccccatcagttca
aagatgggcgacaccaataatgtgttccgtaggatagtaactgctgctgagcgcccgcat
ttgagcattcctgaaactgaagcagggagaagtcgcaagcaatacaatcgacttgtcaac
cgctctctcatgtttgtttcagttggagctgcggtggccattgttgggctagcagcttac
cgagtatatgctgcgagaaagaactcttctggttga
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