Populus trichocarpa (black cottonwood): 18098799
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Entry
18098799 CDS
T01077
Name
(RefSeq) disease resistance protein RPM1
KO
K13457
disease resistance protein RPM1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
18098799
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
LRR_14
Rx_N
WH_DRP
AAA_22
LRR_4
AAA_14
LRR_8
ATPase_2
AAA_16
AAA_18
NACHT
nSTAND1
SesA
NPHP3_N
AAA_33
NTPase_1
Motif
Other DBs
NCBI-GeneID:
18098799
NCBI-ProteinID:
XP_006382612
UniProt:
A0A3N7F2A2
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All DBs
Position
5:2278616..2282474
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AA seq
931 aa
AA seq
DB search
MAESAVSLVVDKLLPLLTQEVKLLKGVHDELVGVKDELEVIRAFLKDADSKAGKEGIGEG
VKVLVNQIREEAHHIEDVIDDYMLHVARHPDNRHGLLRHIASLIKTFSSRHEIASEIKDI
KSSLLDIKNRSQTFHFISSNQGASSSNSNAGRGLMDHPRLSSLFIEEAELVGIESPRDEL
ISYLLSGVSQRTVIAVVGMGGVGKTTVAKKVYDNHRVKEHFQYHAWITVSQSYDKRELLR
SILKRFYEVKNGLFPDRIVTMEEEELIKEIREYLGQERYLVVFDDVWEIGFWGNMEHALL
DHDNGSRILATTRNEDVANFSRGSSLVHVYHIEPLPQKEAWELFCNKAFRSEFKGQCPKD
LEELSQDIVRRCGGLPLAIVAVSGLLATKEKSILEWKKFLSGLGGSAMVSDPYIDSVTNI
LSLSYGDLPYHLKSCFLYFGMFPEDFSIVHGRIIRLWVAEGFVEEKPGMTLEDVGEEYFI
ELVRRNLVQVDEVFHGVPLTCHVHDMVRDVILSKSEELSFCHVSSSCSTFQGIARHLSIS
NRGSNTPKSSTKSQTRSIMVFDEVKLQKATIQVILAKFKLLTTLDFENCPIDHLPKELGN
LLHLRYLNLRNTKVAKLPKSIRKLHNLESLDLRYSFVEELPVKISNFPKLRHLLAEDKKT
RALKIKGSIKHLEFLQTLSKINVDDNVSLINDGLQVSTELKTLGIRNLKREHGRYLCTAL
EKMTHLRLLLVCSINPTNEVLELQSMSSPPLELRSIWLEGQLERLPNWISKIHNLAELRL
SFTNLKDDSFEVLQALPNLNRLGLVCAYNGEKMHFEGGGFQKLKSLYLVGLSNLKEMLID
EGALPLLEKLQMGPCPKLKEVPSGFKYLRYLKDLSFTGMTNEFTQRLSQQESEKVRHVPI
IQYDGTYDPSDEGSYEAWVERYFRRVGIKMT
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtcggcggtgagccttgttgttgataaattgcttccgttgctaacacaagaa
gtgaaactattgaaaggcgtccatgatgaattggttggtgtcaaagatgaattggaagtc
attcgtgctttcctgaaagatgcagattcaaaggctgggaaagaaggcatcggtgagggt
gtgaaagtactggtaaaccaaataagagaagaagctcatcacattgaagatgtcatcgat
gattacatgttgcatgtggcaagacatcctgataatcgacatggactcctacgtcatatt
gcttctttgattaaaacattcagttcgcgtcatgagatagcatcagagattaaagacatc
aaatcatcacttctagatatcaagaatagaagtcaaacattccacttcatttcttcaaat
cagggagcatcaagcagcaacagcaatgcaggaagagggttaatggatcaccctcgactg
agttctcttttcattgaagaagctgagcttgttgggattgaatctccaagagatgaattg
ataagctacttattaagtggagtttctcaaaggacagtgatcgcagtggttggaatggga
ggtgtgggaaaaaccacagtggccaagaaagtatatgacaaccacagggtgaaagagcac
ttccaataccatgcttggatcactgtgtctcaatcatatgataagagggagctactacgg
agcattctgaagagattctatgaagtgaaaaatgggctttttcctgatagaattgttaca
atggaggaggaggagttgatcaaggagattagagaatatttaggacaagaacgatacctg
gttgtatttgatgatgtatgggaaattggcttttggggaaacatggagcatgcgttgtta
gatcatgataatggcagtagaatattggccacaacaagaaatgaggatgttgctaatttt
agcagaggatcttcattggttcatgtctatcatatagaacctttacctcaaaaggaggcg
tgggaactcttctgcaataaagcattcaggtctgagtttaaagggcaatgtccaaaagat
ctggaggaattgtcacaggacattgttagaagatgtggaggattgcctctggcaattgtg
gctgttagtggacttctagcaaccaaagaaaagagcattctagaatggaaaaaattcctc
agtggccttggtggttctgcaatggtgagtgatccatacattgatagtgtcactaacatt
ctatctctcagctatggtgatctgccttaccacctcaaatcttgtttcttatattttggc
atgtttcctgaagatttttccattgtgcatggaagaataattcgattatgggtggctgag
ggttttgtagaagaaaaaccaggcatgacactagaggacgttggagaagaatacttcatt
gaactcgttcgtcgaaatttggttcaagtggatgaagtttttcacggagttcccttaaca
tgtcatgttcatgatatggtccgtgatgtcattctttccaagtcagaggaactgagtttc
tgccatgtttccagcagttgctcaacttttcaaggcatagcacgacatctctcaataagc
aacagaggaagcaacactccaaagagtagcaccaagtctcaaactcgctctattatggtc
tttgacgaagtaaagctgcagaaggccacaattcaagtgatacttgcaaaattcaagctt
ttgactacattagattttgaaaactgtcctatagatcaccttcccaaagaacttggaaat
ttgctacatctaaggtatttaaacttgagaaataccaaagtagcaaaacttccaaaatca
ataagaaagctgcataacctggaatctttagatttgagatattctttcgtggaagagttg
ccagttaagatcagtaatttccctaaattgcgacatcttttggctgaagataaaaagact
cgggcattgaagataaaaggcagcattaagcatttggagttcttacaaacattgtctaaa
attaatgtggatgacaatgtgagcttgatcaatgacggcctgcaagtgtcaacggaattg
aagacattgggtatcagaaatttgaaaagggaacatgggaggtatctatgcactgcattg
gagaagatgactcacctgcggttgctacttgtttgttcaataaatcccacgaatgaagtt
cttgaattgcaatcgatgtcttctcctcctcttgagctgcgaagtatctggcttgagggc
caattagaaaggttaccaaattggatttccaaaatacacaatctggctgaactgagattg
agtttcacaaacttgaaggatgattcctttgaagtccttcaagctctgcccaatctaaat
cgtcttggactcgtatgtgcatacaatggagagaagatgcattttgaaggaggagggttt
cagaaactcaagtctctgtatcttgtaggcttgagtaatttgaaggaaatgttaatagac
gaaggagcattgccacttcttgaaaagctacagatgggaccttgcccaaaactgaaggaa
gtgccttctggatttaagtacttgagatatctcaaagatttatcattcacagggatgaca
aatgagttcactcaaagattgtcacagcaagaatcagagaaagtgaggcatgtaccgatt
atccaatatgatggtacttatgatcccagtgacgaaggatcttatgaagcatgggtggag
cgatatttcagacgagtaggaatcaaaatgacctaa
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