Populus trichocarpa (black cottonwood): 18098802
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Entry
18098802 CDS
T01077
Name
(RefSeq) nuclear transcription factor Y subunit C-3
KO
K08066
nuclear transcription factor Y, gamma
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
18098802
Transcription factors [BR:
pop03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
18098802
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Histone
CBFD_NFYB_HMF
CSF-1
SusD-like_3
Motif
Other DBs
NCBI-GeneID:
18098802
NCBI-ProteinID:
XP_006382615
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Position
5:complement(2305074..2308457)
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AA seq
250 aa
AA seq
DB search
MEQGHGQPPAIVSSTSQLQYGTSPYQPNQMLAASNPGSVTGQPVGAQLAQHQLAYQQIHQ
QQEQQLQQQLQSFWANQYKEIDKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFSR
ACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASI
PRGTMPVGGPVDALSYCYMPPPHAPQVGAPGMIMGKHVMDPAMYAQQSHPYMAQHMWPQG
SEQQQSPSDH
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagggcatggacagccccctgctatagtcagtagtacatctcaactgcaatac
ggaacaagtccgtatcagcctaaccaaatgcttgctgcctcaaatcctggatcagttact
ggtcagcccgtgggagctcagcttgcacagcaccaacttgcctatcagcagatccaccaa
caacaggaacagcaactccagcaacaacttcagtctttttgggcaaatcagtataaagaa
attgacaaagttaccgacttcaaaaatcatagccttcccttggctaggatcaagaagatc
atgaaggctgatgaggatgtgaggatgatatcagctgaggcaccagttatattttccaga
gcatgtgaaatgtttattttagagttgacattgcggtcttggaatcacacggaggagaac
aagagaaggacactgcagaagaatgatattgctgcagcaatcactaggactgacatcttt
gatttcctggttgacattgtgcctagggaggatctgaaagatgaagtgctagcatcaatc
ccaagaggaacaatgcctgtcggaggacctgttgatgcactctcttactgctatatgcca
cctccgcatgcacctcaggttggagctcctgggatgataatgggcaagcatgtgatggac
ccagctatgtacgcccagcagtctcacccctatatggcacagcatatgtggccacaagga
tcagagcaacagcagtcgccctcagatcattag
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