KEGG   Populus trichocarpa (black cottonwood): 18098811
Entry
18098811          CDS       T01077                                 
Name
(RefSeq) DNA excision repair protein ERCC-1
  KO
K10849  DNA excision repair protein ERCC-1
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03420  Nucleotide excision repair
pop03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    18098811
   03460 Fanconi anemia pathway
    18098811
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pop03400]
    18098811
DNA repair and recombination proteins [BR:pop03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     18098811
SSDB
Motif
Pfam: Rad10 HHH_5 HHH_2 HHH HRDC DUF6376 Fic_N
Other DBs
NCBI-GeneID: 18098811
NCBI-ProteinID: XP_024456590
LinkDB
Position
5:complement(2354128..2357453)
AA seq 407 aa
MEREERGEEQNTNSSNQNKKVLIQIPSYQEVIESSQVKPTQTQESSLFKPSQTFSQAFSF
IKNSEFYSPPPPPPSKSEHGPSSSATTSEKVSPSPLASAPAASFGGGVASSSVQNNQSRN
AILVSHRQKGNPLLKHIRNVKWAFADVVCDYLLGQSSCALYLSLRYHLLHPDYLYYRIRE
LQKNCKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKMYENKP
ADLIQGQMDTDYSSRLHHALTTVRRVNKTDVVTLGSTFGSLSNIMDASMEDLARCPGIGE
RKVKRLYDTFHEPFKRVVSSHPVVPQTPVQKDTEPSSVDEVAEMEMEEANANKRRKKEPE
LTVKSALSSAFAKCATNKLGNKKFQREKVGETSTAIDSEAETRKTSG
NT seq 1224 nt   +upstreamnt  +downstreamnt
atggagagagaagaaagaggagaagagcaaaacacaaattcatcaaaccaaaacaaaaaa
gtactaatacaaataccatcctaccaagaagtaattgaaagctcacaagttaaacctaca
caaacacaagaatcatcattatttaagccatcacaaactttctctcaagctttctccttt
attaaaaactctgaattctactctcctcctcctcctccaccttcaaaatctgaacatggg
cctagtagttctgcaaccacgagtgaaaaggtttcaccatctccattggcatcagctcct
gctgcttcttttggtggtggagtggcttcatcttcagtgcaaaataatcagagtcgcaat
gctattcttgttagtcatagacagaagggaaaccccttgcttaaacatattaggaatgta
aagtgggcttttgcggatgttgtttgtgactatttgcttggacagagctcatgtgctctt
tatctaagtcttcgatatcatttactccatccagactacctatattaccgtataagagag
ctacaaaagaactgcaagcttcgtgttgttctatgccatgttgatgtggaggatgtagtt
aagcctttacttgaagtcacaaaaacagctctgcttcatgattgtacactattatgtgct
tggagcttggaggaatgtggtcgctacttggagactataaaaatgtatgaaaacaagcct
gcagaccttattcagggccaaatggatactgactattcatctcggctacaccatgctctc
acaactgttcgacgtgttaacaagacagatgtggtaacacttggatctacatttgggtct
ctttctaatatcatggatgcatccatggaagatctagctcgttgccctggaataggagag
cgcaaggtgaaacgcttgtatgatacttttcatgaaccattcaagcgtgtagtttcaagc
caccctgttgttccacaaaccccagtccagaaagacactgaaccttcctcagtcgatgag
gttgcagaaatggagatggaggaagcaaatgcaaacaaacgtaggaagaaagaaccagaa
ttaactgtcaagtcagccctatcttctgcatttgcaaagtgtgctactaataaattgggt
aataagaaattccaaagagaaaaggttggagaaacaagtactgccattgactcggaagct
gaaactaggaaaacctccggttaa

DBGET integrated database retrieval system