Populus trichocarpa (black cottonwood): 18098956
Help
Entry
18098956 CDS
T01077
Name
(RefSeq) probable ribose-5-phosphate isomerase 3, chloroplastic
KO
K01807
ribose 5-phosphate isomerase A [EC:
5.3.1.6
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00030
Pentose phosphate pathway
pop00710
Carbon fixation by Calvin cycle
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01200
Carbon metabolism
pop01230
Biosynthesis of amino acids
Module
pop_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
pop_M00007
Pentose phosphate pathway, non-oxidative phase, fructose-6P => ribose-5P
pop_M00165
Reductive pentose phosphate cycle (Calvin cycle)
pop_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
18098956
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
18098956
Enzymes [BR:
pop01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.6 ribose-5-phosphate isomerase
18098956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rib_5-P_isom_A
DeoRC
Motif
Other DBs
NCBI-GeneID:
18098956
NCBI-ProteinID:
XP_006382781
LinkDB
All DBs
Position
5:complement(3290212..3291392)
Genome browser
AA seq
291 aa
AA seq
DB search
MASLSLLPSPSSSSSSSSLSSLHHTTRSSSRLTLRTPSLNLRTRTKISSIKAQSAPVLTQ
DDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKLGELLKTGELKDIIGVPTSKRTEEQ
ARSLNIPLSVLDDHPHIDLAIDGADEVDPLLNLVKGRGGALLREKMVEAASDEFVVVADD
TKLVDGLGGSKLAMPVEVVQFCWKYNLLRLQEMFKDEGVEAKLRAGEDGKPYVTDNFNYI
VDLYFENPIKDGYAAGKEISGLEGVVEHGLFLDMATAVIIAGKTGVEVKSK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttatccttgctcccctctccttcctcctcctcctcctcctcctctctttcc
tccctccaccacaccacccgttcctcatcccgcctcaccctacgcaccccgtcccttaac
ctccgcacccgcaccaaaatctcctccatcaaagcccaatccgctccagtcctcacccag
gacgaccttaaaaaacttgctgccgacaaagccgtagagtatgtcaaatccggcatggtc
ctcggccttggtaccggctccaccgccgccttcgtggtagccaaactcggcgagctctta
aagaccggggaactgaaagacatcattggagtcccaacttctaaacgcacagaagaacaa
gctcgttctcttaacattcccctttcggtcctggatgaccatccccacattgatcttgcc
attgatggagctgatgaggtagacccacttcttaatttagtaaagggtcggggtggagcc
cttttgagagagaaaatggttgaagctgcatcggatgagtttgttgttgtcgctgatgac
actaagcttgtggatggtcttggtggaagtaagctggcaatgccagttgaagtagtgcaa
ttttgttggaaatataacttgttgaggttacaagaaatgtttaaagatgaaggggttgag
gctaaattgagagctggtgaagatgggaagccttatgtgaccgataattttaactatatt
gttgatttgtactttgagaatcccattaaagatgggtatgccgcggggaaggagatttcg
gggcttgaaggtgtcgtggaacatggtttgtttttggatatggcgaccgcggttattatt
gctgggaagacaggagttgaggttaaaagcaagtga
DBGET
integrated database retrieval system
