Populus trichocarpa (black cottonwood): 18098978
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Entry
18098978 CDS
T01077
Name
(RefSeq) E3 ubiquitin protein ligase DRIP2
KO
K16277
E3 ubiquitin-protein ligase DRIP [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
18098978
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
18098978
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
18098978
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
RAWUL
zf-C3HC4_4
zf-RING_2
FANCI_S4
zf-RING_6
zf-Nse
Motif
Other DBs
NCBI-GeneID:
18098978
NCBI-ProteinID:
XP_024456630
LinkDB
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Position
5:3440303..3445630
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AA seq
442 aa
AA seq
DB search
MSGQIVKVKREILEACMTCPLCNKLLKEATTIFSCLHTFCRKCIYEKLSDEEVDCCPVCN
MNLGCLPVDKLRADHNLQDIRAKIFPFKRRKVKAPEIIPSIALPAKRKERSLSSLVVSTS
KVPIQTGLTGRRSKAGARKAAALRGCSFTVEESKNEDSAKDNLSSPGSPVKSIQKRRLDS
SVAEPSTEQRPNDDGEDDDVQMIEGKADLWTPLNCLVEAANRTKSSKSHSQRLSLAKFGL
LDGPDSKPHLYESRAESPNGQHSDIYMAKTKNEHGQGIRVLDDKNGTNSLPVSVKRRRLT
AAQKRAAMSEGLGASAQAMVDAAAAKSNRRNGPIWFSLVASEDQKRDASLPQISACYLRI
QDGKMPVSFIQKYLVKKLDLGSETEVEIMCRGQPVSPTLRLQNLVNLWFCTGSTSKKVSA
SVGSSAKDFVMVLSYCRKVQES
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggacagattgtgaaagttaagagagagatattagaggcatgcatgacatgccct
ctttgcaataagctcttaaaagaagctaccacgattttttcgtgtctccatacgttctgc
aggaaatgcatatatgaaaagctctcagatgaagaggtagattgttgtcctgtatgcaat
atgaatctgggttgtcttccagtagacaaactcagggcagaccataatttgcaagatata
agggctaaaatatttccttttaagagaagaaaagttaaggcccctgaaattattccttca
attgcattgccagcaaaaagaaaggagagatcattatcgtcattggtggtcagcacttcc
aaagtgccaattcaaactggcttgacaggaaggagatctaaagctggtgccagaaaggct
gctgcattacgaggatgcagttttactgttgaggaatccaagaatgaagattctgccaaa
gataatttgagctcaccagggtcccctgtcaaaagtattcagaagagaaggctggattcc
tctgtggctgaaccttctactgagcaaagacctaatgatgatggcgaggatgatgatgtt
caaatgattgaagggaaggctgatctatggacgcccttgaattgtcttgttgaagctgct
aacagaaccaagtcctccaagtcgcattcacaacgactgtctctagccaaatttggcctg
cttgatggccctgatagcaaacctcatctgtatgaatccagagcagaatcacccaatggt
caacacagtgacatatatatggctaaaacaaaaaatgagcatggacagggaataagagtc
ctagatgacaagaatggaacaaattcgcttcctgtatcagtgaagcggagaaggttaaca
gcagcacaaaaaagggcagctatgtctgaggggttgggtgcctcagctcaagcaatggta
gatgctgcagcagctaagagcaatagaagaaacggtccaatatggttctcattggttgcc
tctgaagaccagaaaagagatgcttccttgccacagatatccgcatgctacttgaggatt
caggatggtaaaatgccggtgtctttcatccagaagtatctcgtaaagaaactcgatctt
ggtagtgaaactgaggtggaaataatgtgccggggtcagcccgtcagcccaactttgcga
ttgcagaacttagtaaacttgtggttttgtactggttcaacgtcaaaaaaagtatcagca
tccgtgggttcctcggcaaaggacttcgtgatggtattgtcatattgtcgaaaagtccaa
gagtcataa
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