Populus trichocarpa (black cottonwood): 18098996
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Entry
18098996 CDS
T01077
Name
(RefSeq) flowering locus K homology domain isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
18098996
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
18098996
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
RemA-like
Motif
Other DBs
NCBI-GeneID:
18098996
NCBI-ProteinID:
XP_006382821
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Position
5:3526554..3534438
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AA seq
529 aa
AA seq
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MAEVDQGFGEHEIDHGVDLSADQGVGHPVDHDLDNAADHGLDHAVDHSLGHSVDHGLDHA
TDPGLAVEHDIDHPIDHHVDPSIDHDVDHPVNHDIDHAIDQVPENFEASKQGQDEDTVSG
GGSEKRWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERA
VMVSAKEEPDSSLPPAMDGLLRVHKRIIDGLEGDSSHAPPSSGAKVSTRLLVPASQAGSL
IGKQGGTVKSIQEASACIVRVLGAEDLPVFSLQDDRVVEVLGEAVGVHKAVELIASQLRK
FLVDRSIIPLFEMQMQMANPPMEQMPPHQSWGGPQSLPLNPVGGPGYGQNPQYMQPPRQH
DNYYPPSDMPPPMEKQPHQGISAYGRQTPMGGHASSNAQAAPSMITQITQQMQIPLSYAD
AVIGTAGASISYIRRASGATVTIQETRGVPEAMTVEISGTASQVQTAQQLIQNFMAEAGA
PAQPQTGGPADQGYNPYSHSSVYASPPSNPEHTGHTGGYSSMYGASFGY
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagttgatcaaggctttggtgagcatgaaattgatcatggcgtggacctttct
gctgatcaaggtgttggtcatcctgtagaccatgacttggataatgccgctgatcatggc
ttagatcatgcagtagatcatagcttgggtcattctgtggatcatggtttggatcatgcc
acagatcctggattggcagtagagcatgacattgatcaccctatagatcatcatgtggat
ccgtctatagaccatgatgtggatcaccctgtaaaccatgacatagaccatgctattgat
caagtgcctgagaattttgaggcttcaaagcaaggacaagatgaggatacagtctctgga
ggaggtagtgagaagaggtggcctggatggcctggagagagtgtgtttcggatgttggtt
cctgcacaaaaagttggcagtatcattggccgcaaaggggagttcattaaaaagatagtc
gaagagacaagagctcgcatcaagatacttgatggtcctccagggacgacagaaagagct
gtaatggtatctgccaaggaggagcctgattcttctcttcctcctgccatggatggccta
ctgagggttcacaaacgcattattgatggtttggagggtgattcttctcatgctccacca
agcagtggagctaaggtttcaacaaggctgctagtaccagcctcacaagctggaagtttg
ataggaaaacaagggggaactgttaaatccatccaagaggcatcagcttgcatagttaga
gttcttggtgcagaagaccttccagttttttctcttcaagatgatagggtggttgaagta
ttaggggaagcagttggagtgcacaaagcagtggagttaattgcatctcagctcaggaag
tttctagttgaccgaagtataattccattgtttgaaatgcagatgcaaatggcgaatcct
ccaatggaacagatgccaccacatcaatcatggggtggacctcaatcccttcctctgaat
cctgttggaggacctggttatggccaaaatccccaatatatgcaacctccacggcaacac
gacaattactatcctccatctgacatgccacctccaatggaaaaacaacctcaccagggt
atatctgcatatggtagacaaactcccatgggtggtcatgcatcatcaaatgcccaagca
gcaccatcaatgatcacacagattacacaacaaatgcaaattccattatcttatgctgat
gctgttattgggacagctggtgcaagtataagctacattcgacgtgctagtggggcaact
gttactatacaagaaactagaggtgttcccgaggcaatgacagttgaaatcagtggaact
gcttctcaagtccaaacagctcagcagctgatacagaatttcatggctgaagctggagca
ccagcacagcctcaaacaggtgggcctgctgaccaggggtataatccttattctcacagt
tcagtgtatgcttctccaccatccaatccagaacacacaggccatacagggggttatagc
tccatgtatggtgcaagctttgggtactaa
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