KEGG   Populus trichocarpa (black cottonwood): 18099162
Entry
18099162          CDS       T01077                                 
Name
(RefSeq) rac-like GTP-binding protein RHO1
  KO
K04392  Ras-related C3 botulinum toxin substrate 1
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04145  Phagosome
pop04148  Efferocytosis
pop04620  Toll-like receptor signaling pathway
pop05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:pop00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    18099162
   04148 Efferocytosis
    18099162
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    18099162
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    18099162
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    18099162
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pop04147]
    18099162
   04031 GTP-binding proteins [BR:pop04031]
    18099162
Membrane trafficking [BR:pop04131]
 Exocytosis
  Small GTPases and associated proteins
   Rho GTPases
    18099162
 Endocytosis
  Lipid raft mediated endocytosis
   Arf6-dependent endocytosis
    18099162
  Macropinocytosis
   Ras GTPases
    18099162
 Others
  NADPH oxidases (Nox) and associated proteins
   Nox associated proteins
    18099162
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   18099162
  Exosomal proteins of other body fluids (saliva and urine)
   18099162
  Exosomal proteins of colorectal cancer cells
   18099162
  Exosomal proteins of bladder cancer cells
   18099162
GTP-binding proteins [BR:pop04031]
 Small (monomeric) G-proteins
  Rho Family
   Rac/Cdc42 [OT]
    18099162
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU
Other DBs
NCBI-GeneID: 18099162
NCBI-ProteinID: XP_006383072
UniProt: B9MXD5
LinkDB
Position
5:complement(8048573..8051798)
AA seq 197 aa
MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD
TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL
DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIRVVLQP
PKQKKKKSKAQKACSIL
NT seq 594 nt   +upstreamnt  +downstreamnt
atgagtgcatcaaggtttataaagtgtgtgacggtaggagatggagctgttggtaaaact
tgtctcttgatttcatacaccagcaacaccttccctacggattatgtgccaacggttttt
gacaatttcagtgcaaatgtggtcgtcaatggtgctactgttaacctggggttgtgggat
acagctgggcaagaggattataatagattaagaccattgagttatcgtggggcagatgtt
ttcatactggcattctctctcattagcaaggccagttacgaaaatgtttctaagaagtgg
attccagagttgaagcattatgcacctggtgtcccaatagttcttgttggaacaaaactt
gatcttcgggatgataagcagttcttcatcgaccaccctggtgctgtgcctattactaca
gctcagggagaggagctgaggaagctgattggtgcacctgcttatattgaatgcagttca
aaaacacagcagaatgtgaaggcagttttcgacgcagccatcagagtcgtccttcaacct
cccaagcaaaagaaaaagaagagcaaagcacaaaaggcctgttctatattgtga

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