Populus trichocarpa (black cottonwood): 18099183
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Entry
18099183 CDS
T01077
Name
(RefSeq) cold shock domain-containing protein 3
KO
K09250
cellular nucleic acid-binding protein
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
18099183
Transcription factors [BR:
pop03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
18099183
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
CSD
zf-CCHC_5
OB_RNB
zf-CCHC_3
zf-CCHC_2
zf-CCHC_4
EcoRI
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
18099183
NCBI-ProteinID:
XP_006383095
UniProt:
B9MXF4
LinkDB
All DBs
Position
5:complement(8172066..8173136)
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AA seq
235 aa
AA seq
DB search
MAEEQVAATKEERSTGRVVRFSDKKGFGFIKPDAGDKDLFVHHSAIKSDGGYRTLYEDDV
VEFTILLNDDKYQAVDVTAPGGGPIKRRTTFSGGFNRRNSNTNGGGCFNCGNPGHIAREC
NNNSSKSYNYNNNNNRTGGGGGDFGCYKCGNSGHFARECTKGNNNNGCYSCGGFGHVARD
CPGGSGACYNCGGHGHLARDCTSARGSGGGRFGSGNTGGCFNCGKDGHFARDCPE
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagcaagtggcggcgaccaaggaggagagatcgaccggcagggtggttcgt
ttcagcgacaagaaaggatttggattcatcaaacctgatgccggcgacaaagatctcttc
gttcaccactccgccatcaaatccgacggtggataccgtactctttacgaagacgacgtc
gtcgagttcaccattctactgaacgacgacaagtaccaagcggttgacgtcactgccccc
ggtggcggacctataaaacgccgcactaccttctccggtggattcaaccgccgcaacagc
aataccaatggtggtggctgcttcaattgtgggaatcctggccacatagctagggagtgc
aacaataacagtagtaagagttacaattacaataataataacaatcgcaccggcggcggc
ggcggcgattttggttgctacaagtgtgggaacagtgggcattttgcgagggagtgtacg
aaggggaataataataatgggtgttacagttgtggagggtttggacatgttgcgagggac
tgcccgggcgggagtggagcttgttataactgcggtgggcatggacatttggctagggat
tgcaccagtgcgagaggaagtggtggaggaaggtttggtagtggtaataccggcgggtgt
tttaattgtgggaaggatgggcattttgctagggattgtcctgaatga
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integrated database retrieval system
