KEGG   Populus trichocarpa (black cottonwood): 18099202
Entry
18099202          CDS       T01077                                 
Name
(RefSeq) RNA demethylase ALKBH9B
  KO
K10767  mRNA N6-methyladenine demethylase [EC:1.14.11.53]
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pop03019]
    18099202
Enzymes [BR:pop01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.53  mRNA N6-methyladenine demethylase
     18099202
Messenger RNA biogenesis [BR:pop03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     18099202
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2 Zn_ribbon_3CxxC_2
Other DBs
NCBI-GeneID: 18099202
NCBI-ProteinID: XP_006383115
UniProt: U5GHI4
LinkDB
Position
5:complement(8387635..8391764)
AA seq 506 aa
MTELNKSDKDDPFLVQYQPSDLNIASEFLSTWLPYLSRDLCHNCSKTLSDRIRSLSELQG
EDKSGDLPTLNINVESSNGNCGSDGNCNDNSVGSLKEDDDTNSLGSWKDGINGWSEPPVS
EASSSGVHSEWRSGMSWADMAQEDELVEEEEQEQQELNARMVNVNDSTGGLRITKVVGKP
TTLPREQREYIRFMNVKRKKDFMCFEKINGKLTNILQGLELHTGIFSAAEQKRIVDYVYA
FQEKGKKGELKERTYSAPQKWMRGKGRVTLQFGCCYNYTIDKNGNPPGILQDEMVDPIPD
LFKVIIRRLVQWHVIPPTCVPDSCIVNIYEEWDCIPPHIDSHDFVRPFCTVSFLSQCNIL
FGSNLKVVGAGDFDGPIAIPLPVGSVLVLNGNGADVAKHCVPSVPTKRISITFRKMDEAK
RPIGFVPEPDLQGIQPLSYELDKTRKLNSPKSEPYVKRRPYGKEGQVEGRRYPEDGSQSE
SRYSSRNRWPAANQWRTKGNMGRADG
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgaccgaactcaataaatccgataaagatgacccgttcctcgttcaatatcaaccttcc
gatcttaatatcgcatcggagtttctttccacgtggctcccatacctctctcgggatctc
tgtcataactgctccaaaactctctccgatcgcattcgctctctctcagaactccaagga
gaagataagagtggggatttgccgactttgaatattaatgtggaatcgtcaaacgggaat
tgtggttctgatggtaattgtaatgataattctgtgggaagtttgaaagaggatgatgac
acgaattcgttaggtagttggaaagacgggataaatgggtggtctgagccacctgtttca
gaggcctccagtagtggagttcatagtgaatggcgctcggggatgtcttgggctgatatg
gctcaggaagatgaacttgtggaagaggaggaacaagaacagcaggagttgaatgcacgg
atggttaatgtgaatgattcaactggtgggttgaggataacaaaggttgttgggaagcct
actacattaccaagggagcaaagggaatacattcggtttatgaatgtgaagaggaagaaa
gactttatgtgttttgagaagattaatggaaagcttactaatattctccagggcctggag
cttcacacgggtattttcagtgctgcggagcagaagaggattgttgattatgtttatgca
tttcaagagaaagggaaaaagggagagttgaaagagcgcacatattcagctccacaaaag
tggatgaggggcaaagggcgggtgaccctccagtttggttgttgttacaattacacaatt
gataaaaatggtaatccgccaggcatcctccaggatgaaatggtagatcctatacctgac
ctttttaaagtgatcattagaaggctggtccaatggcatgttatccctccgacttgtgtg
cccgacagttgtattgttaacatttatgaagaatgggactgtataccacctcatattgac
agccatgattttgttcgacctttctgtactgtgtcttttcttagccagtgcaatatacta
tttggatcaaacttaaaggttgtgggtgcaggtgactttgatggtccaattgctatccct
cttcctgtgggatctgttcttgtcttaaatggaaatggagccgatgtggctaagcattgt
gtgccatcagttcctacaaagaggatatcaatcacatttagaaaaatggatgaagcaaaa
cgtcctataggttttgttccagaacctgatttgcagggaattcagccattatcatatgaa
ctggataaaacaaggaagttaaattctcctaaatcagagccttatgtgaaaaggcggcca
tatggtaaagagggtcaggtggaagggaggagatatcctgaggatggttcccaatcagaa
tctcgttactcaagtcggaatcgatggccagctgcaaatcagtggaggactaaggggaat
atgggcagagctgatggatga

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