Populus trichocarpa (black cottonwood): 18099223
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Entry
18099223 CDS
T01077
Name
(RefSeq) PHAF1 protein At3g51130 isoform X2
KO
K27411
phagosome assembly factor 1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
18099223
Membrane trafficking [BR:
pop04131
]
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Other autophagy associated proteins
Others
18099223
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Gene cluster
GFIT
Motif
Pfam:
PHAF1
Motif
Other DBs
NCBI-GeneID:
18099223
NCBI-ProteinID:
XP_006383137
UniProt:
B9MXJ0
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Position
5:complement(8556492..8560608)
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AA seq
401 aa
AA seq
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MLHHHHNHHQSQRPRRRCEGTAMGVIILDLRPGNGIGPFSLGMPICEAFAQIEQQPSIYD
VVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRYATSLIGGPS
NLATFVAVYALFGPTFPGIYDKDRGVYTLFYPGLSFAFPIPSQYTDCFHGREAELPLEFP
DGTTPVTCRVSIYDGSADKKVGVGSLMHKASAPPLLPGNLYMEEVHVKLGEELYFSVGGQ
HIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDLRPRTTLCGDYFYNYFTRGLDILF
DGQTHRIKKFVLHTNYPGHADFNSYIKCNFVIQVDNSKQSITPSTKWDQVKEILGDCGRA
AIQTQGSTSNPFGSTFVYGYQNIAFEVMKNGYIATVTLFQS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgttacaccaccaccacaatcaccaccagtcacagcgaccgcgacgccgctgtgaaggc
actgctatgggcgttatcattctcgatctccgccctggtaacggcatcggtcctttctct
ctggggatgccaatatgtgaagcatttgcacagattgaacaacaacctagcatatacgac
gtcgttcatgtgaagtacttcgatgaggagccattaaaacttgatattgttatcagcttt
cctgatcatgggtttcatcttcgattcgatccgtggtcacaaaggttacgattgattgag
attttcgatgtgaaacgtcttcaaatgcgctacgctacatctcttattgggggaccatca
aatctagctacttttgttgctgtatatgcgctttttggacctacatttcctgggatttac
gacaaagatagaggcgtgtacactttgttttacccaggtttgtcatttgcttttccgatt
cccagccagtatacagattgttttcatggtagagaagcggaactgccactagagtttcca
gatggcactacaccagttacatgtcgagtctctatatatgatggttctgcggataaaaaa
gtaggtgttggatctttaatgcataaggcttctgcacctccattacttcctggtaacctg
tatatggaagaggtgcatgttaagcttggggaagaattatatttctctgttggagggcag
catattccttttggtgcatcaccacaggatgtatggacagaattaggtcgtccatgtgga
attcatcaaaagcaggttgaccaaatggtcattcactctgcttctgaccttcgcccgagg
acaaccctttgtggagactacttttacaattacttcactcgtggtctggatatcttattt
gatggacagactcatagaatcaaaaagtttgttttgcacacaaactatcctggtcatgca
gatttcaattcgtacatcaagtgcaattttgtcatccaagttgacaactccaaacagagt
attacaccaagcacaaaatgggaccaggtgaaggagatccttggggactgtggtcgagca
gctattcaaacacagggatctacaagcaatccttttggttccacttttgtatatggttat
cagaacattgccttcgaggtgatgaagaatggttatattgcaactgtaactctcttccag
tcatga
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