Populus trichocarpa (black cottonwood): 18099234
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Entry
18099234 CDS
T01077
Name
(RefSeq) protein SHI RELATED SEQUENCE 1
KO
K27807
short internodes/stylish family transcription factor
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
18099234
Transcription factors [BR:
pop03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
18099234
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GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
18099234
NCBI-ProteinID:
XP_006383148
UniProt:
B9MXK1
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Position
5:complement(8673012..8675503)
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AA seq
344 aa
AA seq
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MAGLFSLGRDSSSSGNNQEQQQNNNNSNPPNEIPQENWFCYRSEDNSYKGFELWQQHHHH
QELLHQRHQNPQQDLYSSAVGLGVGPSRASINISDESSSRSAAAAAFMMMRPVGSGVGGS
ISCQDCGNQAKKDCVHMRCRTCCKSRGFECQTHVKSTWVPASKRRERQHQLTIFQQQQQQ
QLQIRGENPKRQRENPSPSSLACTHLANNMSGLELGNFPAEVSSPALFRCVRVSGIDESE
EMLAYQTAVNIGGHVFKGVLYDRGPESNYLAPGETSSGGGGGVQPLNLIAAGTATTSATI
SATGGGGGVTVASTTASFLDPSSLYPAPLNTFMAGTQFFPNPRS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggctggcttgttctcattaggaagagatagtagtagtagtggtaataaccaagaacaa
caacagaacaataacaacagcaacccaccaaatgaaattccacaagaaaactggttttgc
tacagaagtgaagacaattcttacaaaggttttgagctatggcagcaacaccaccaccac
caagaacttcttcaccaaagacaccaaaatccacagcaagatctctactcgtcagctgtt
ggtttaggtgtaggacccagtagagcttcaatcaacatctctgatgaatcctcatcaaga
tcagcagcagcagcagctttcatgatgatgaggcctgttggttctggagtaggaggtagc
ataagttgccaagattgtggcaaccaagcaaagaaagattgtgtacacatgaggtgtagg
acttgttgtaagagtagaggatttgagtgtcaaacccatgtgaaaagcacttgggttcct
gcctctaaacgccgtgaaagacagcatcaattaactattttccagcagcagcaacagcaa
caactgcaaattcgcggagagaatcctaaacgacagagagaaaatccaagcccttcttct
cttgcttgcactcacttggctaataacatgtcagggttagaacttgggaatttcccagca
gaagtgagctctccggcattatttcgttgtgttagagtgagtggcattgatgaaagcgag
gagatgttagcttatcaaactgccgtaaacattggagggcatgtgtttaaaggagttctt
tatgatcgtggccctgaaagcaactacttggcacctggtgagacatcttctggtggtggt
ggtggagtacagccactcaatttaatcgcagctggcacagccacaacatctgccacaatt
tcagctactggtggtggtggtggtgtaacggtggcgtctactacagcttcatttcttgat
ccttcctctttatatcccgccccacttaacactttcatggctggtacgcaattctttccg
aatccaagatcatga
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