Populus trichocarpa (black cottonwood): 18099235
Help
Entry
18099235 CDS
T01077
Name
(RefSeq) protein MICRORCHIDIA 2 isoform X1
KO
K24135
MORC family CW-type zinc finger protein
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
18099235
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
18099235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Morc6_S5
HATPase_c_3
HATPase_c
NET2A_C
Cdh1_DBD_1
Motif
Other DBs
NCBI-GeneID:
18099235
NCBI-ProteinID:
XP_006383149
UniProt:
U5GF49
LinkDB
All DBs
Position
5:complement(8705055..8714523)
Genome browser
AA seq
657 aa
AA seq
DB search
MPPKVEKQQPMNVVEIASSDDEVDIGPPPGMPRKTTPSSSKSRRQQPQKQQQQKQQQQQK
QQQQDSSSEAIAAPVPAYQSLDCRSFWKAGAYDVGPIASKAPAQGQLEHARVHPKFLHSN
ATSHKWAFGAIAELLDNAVDEVHNGATFVKVDKIDIMKDNSPALLFQDDGGGMDPDGIRK
CMSLGYSSKKSNTTIGQYGNGFKTSTMRLGADVLVYSCATRAGKATQSIGLLSYTFLRKT
GQDDVIVPMIDFDISGNRAEPILYGSQDDWSSNLKTILEWSPFASKEELMQQFEDIGRHG
TKIIIYNLWLNDEGIYELSFDDDEEDIRLRDEANHGQTKLHKKTVELRSHISYCIRYSLR
AYASILYLRKFTNFSIVLRGKPVQQFNIVDDLKYSKTVSYKPQVGTIKEVTVETTVGFIK
EAPALSVSGFNVYHKNRLIRPFWKVTGDAAVKGNGVVGVLEANFIEPAHDKQDFERSSLY
IRLEARLKQMVMDYWKRHCHLLGILPPGVKSLDIQKQGAVKTQKPLPANRHNIDLPTNEE
EMHLDQPITRSNRQLGSTGQSDLPVEESIIGLADGSYNGVISDDGLGSKPIDQICEENIE
LFMRCEEYAKKETELKQTVEELEKELEQAKRKCAQLASHLETKRKQKIMQQQSEKVA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctaaagtagagaagcagcaaccgatgaatgtagtagaaatcgcaagtagcgat
gacgaagtcgatattggtcctccgccaggtatgccacgcaaaacgacgccgtcgtcttca
aagtcgaggagacagcagccgcaaaaacagcagcagcaaaaacagcagcagcagcagaag
caacaacagcaagatagtagctcggaagcaatagcggcaccggtgcctgcgtatcagagt
ctggattgtcgaagtttctggaaagcgggagcgtatgacgtgggtcccatagctagcaag
gcccctgctcaaggtcaattggagcatgcaagagtgcaccctaagtttttgcattctaat
gcaacttctcacaaatgggcttttggagcaattgctgagcttttggataatgctgttgat
gaggttcataatggtgcaacctttgtgaaggttgataaaattgatatcatgaaagacaac
tctcctgctctacttttccaagatgatggtggtggaatggatcctgatggtatccggaaa
tgcatgagtttgggttattcttccaagaaatcaaatacaacaattggacaatatggtaat
ggatttaagacaagtactatgcggctaggtgctgatgttcttgtttacagttgtgcaact
cgtgcaggcaaagcaactcaaagcattggtctattatcctacacctttttacgaaaaact
gggcaggatgatgttattgttccaatgattgatttcgacatttctggcaaccgggcagag
ccgatactttatggctcacaagatgactggtcttctaacttgaaaacaatccttgaatgg
tctccattcgcttcaaaggaggagctcatgcaacagtttgaggatattggccggcatggt
acgaaaataataatatacaacttatggttaaatgacgagggcatttatgaattgagtttt
gacgatgacgaagaggatatacgtctgagagatgaagctaatcatggtcagacaaaacta
cacaaaaaaacagttgaacttcgatctcatatttcttattgcatccgttattcattaagg
gcttatgcttcgattttgtacctaagaaaattcacaaatttcagcattgtgctgaggggg
aagcctgtccagcagtttaatattgtagatgacttgaaatattcaaaaacagtgtcatac
aagcctcaggttggaacaataaaagaggtcactgtggagacaacggttggtttcattaaa
gaggctcctgctctttctgtttctggattcaatgtgtaccataaaaatcgactcatcagg
cccttctggaaagtcactggtgatgctgcagtaaaagggaacggtgttgttggagttctt
gaagcaaattttatagaacctgcacatgataagcaggattttgagaggtcgtcgttgtat
attcgattggaagctagactgaaacagatggttatggattactggaaacgccattgtcac
ttgcttggaattctgcctcctggtgtcaaatcacttgatattcaaaagcaaggtgcagtt
aaaacacaaaagccattgcctgctaaccggcataacattgatcttccaactaatgaagag
gaaatgcatctggatcaacctatcactaggagcaataggcaacttggaagcaccggccag
agtgatttacctgtggaagagtccattattgggttggcagatggatcttacaatggagtt
atatctgatgatggtcttggatctaagccaattgatcagatatgtgaagagaacatcgaa
ctttttatgaggtgtgaagaatacgcaaagaaggagactgaattgaaacaaacggttgag
gaattagagaaagagttggaacaagccaagaggaagtgtgctcaacttgcttcgcacctg
gagactaaaaggaaacaaaagatcatgcagcaacaaagtgaaaaggtcgcatga
DBGET
integrated database retrieval system
