KEGG   Populus trichocarpa (black cottonwood): 18099325
Entry
18099325          CDS       T01077                                 
Name
(RefSeq) uncharacterized protein LOC18099325
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    18099325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pop04121]
    18099325
Enzymes [BR:pop01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     18099325
Ubiquitin system [BR:pop04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    18099325
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_UBOX zf-RING_2 zf-C3HC4 zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 RING_XB3-XBAT31 zf-ANAPC11 Prok-RING_4 U-box Baculo_IE-1 Sina_RING zf-rbx1
Other DBs
NCBI-GeneID: 18099325
NCBI-ProteinID: XP_006383256
LinkDB
Position
5:9645275..9646899
AA seq 227 aa
MESGYEESTSVRLESSSFSSNNGTDAGDFECNICFELAQDPIVTLCGHLFCWPCLYRWLH
HHSHSHECPVCKAIIQEEKLVPLYGRGKTQADPRSKSYPGIDIPTRPSGQRPETAPPPDA
NNLPHFGFGMPGGFMPAAPTRIGGFTISTAFGGLSLFPSLFNIQFQGYPDATVYGTTSGF
PYGFHGFHGNRTHRFPPATTRGQQADNVLKNLFFFIGFLVVLALLWW
NT seq 684 nt   +upstreamnt  +downstreamnt
atggaaagtggatatgaggaatcgacaagtgtgcgtctggaaagctcgtctttttcgagc
aataacggcactgatgcaggcgattttgaatgcaatatttgctttgaattagctcaggac
ccgatcgtaactctttgcggtcatctcttttgttggccctgtctataccgatggttacac
caccattcgcattcacatgaatgcccagtttgtaaggccatcatacaagaagagaaattg
gttcctctttatggtagagggaaaactcaggctgaccctcgatctaaatcttatccgggt
attgatattcctactcgcccgtctggacaaaggcctgaaactgctcctccgccggatgca
aataatttaccccattttgggtttggaatgccaggaggattcatgcctgcagcgccaaca
aggattggtggctttacgatttcaactgcttttggtggtctatcacttttcccatcgttg
tttaatattcagtttcaagggtacccagatgctactgtgtatggaacaacatctggattt
ccatatggctttcatggttttcacggcaatcgtacacaccgcttcccacctgcaactact
cgagggcagcaggccgataatgttttgaagaacctcttcttttttattggattcttggtg
gtcctcgctctgctttggtggtaa

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