Populus trichocarpa (black cottonwood): 18099398
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Entry
18099398 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18099398 isoform X1
KO
K13205
A1 cistron-splicing factor AAR2
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
18099398
Spliceosome [BR:
pop03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
18099398
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Gene cluster
GFIT
Motif
Pfam:
AAR2_1st
AAR2
Motif
Other DBs
NCBI-GeneID:
18099398
NCBI-ProteinID:
XP_006383342
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Position
17:complement(12833524..12839922)
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AA seq
402 aa
AA seq
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MDPETALELVKQGATLLLLDVPQYTLVGIDTQMFTVGPAFKGIKMIPPGPHFVYYSSSSK
DGKQFSPIVGFFVDADPSEVIVRKWNQQEERLVKVPEDEEERFCQAVKSLEFDRYLGPYN
LSQYGEWKRLSSYLTKTIIKRIEPIGGEITVACESEMDKNSPKTSIERALHAQLGTGKFS
ASTSVDRSKKRGCYYTTIPRVIKRRGMEGKELTSLNLDKTELLESVLIKDYGGSEDLLLG
ELQFAYIAFLMGQSLEAFFQWKSLVSLLLSCIEAPFRTRSHLFTKFIKVIFYQLKYGLQK
DRKESNGAGIAVSSLLDESWFSADSFLHRLCKDFFLLVQDATVVDGDLLTWTRKLKELLE
NILGWEFQQNSAVDGIYFEEDDEFAPVVEMLDESSFNGVPAA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggatccagagacggcgttagagctggtaaagcaaggagccacactcctcctcctcgat
gtccctcagtacactcttgtcggcattgacactcagatgtttacagtgggaccagcattt
aaaggcatcaaaatgatacctcctggtcctcattttgtttactacagttcttctagtaaa
gacggcaagcaattctcccctatcgttggcttcttcgttgatgcggatccgtctgaggtt
attgttcgtaaatggaatcaacaagaggaaaggctggtgaaggttccagaagacgaggaa
gaaagattttgccaagcagttaaaagtttagagtttgacagatatcttggtccttataac
ctaagccagtatggagaatggaagcgattgtctagttacctcacaaagaccatcatcaaa
cgaattgaacccattgggggagaaattacagttgcatgtgaatctgaaatggataaaaac
agtcctaaaacatcaatcgagagagctctacatgcacaattggggactggtaagttctca
gcatctacatcagttgatcggtccaagaagagaggatgttattacactacaatcccacgt
gttattaaacgcagaggaatggaggggaaagaacttacttctttgaatcttgacaagact
gaattactagaaagtgttttgattaaagactacggaggttccgaagacttacttctaggg
gagctgcaatttgcttatattgcatttttgatggggcaatcacttgaagcattttttcag
tggaaatctttagttagccttctactgagttgcattgaagctccttttcgtacaaggagt
catctttttactaagttcatcaaggtcatcttctatcaactgaaatatggacttcagaaa
gataggaaagaaagtaatggtgcaggaatagcagtatcatcattgctggacgagtcatgg
ttttctgctgatagctttttgcaccgactttgcaaggatttctttttgttggtgcaagat
gccactgtggtggatggagatcttttgacatggactaggaaactgaaagaactacttgag
aatattctgggatgggagttccagcagaatagcgcagttgatggcatatacttcgaagag
gatgatgagtttgctcctgtagttgagatgttggatgagtcgagcttcaatggagttcca
gctgcttag
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