KEGG   Populus trichocarpa (black cottonwood): 18099442
Entry
18099442          CDS       T01077                                 
Name
(RefSeq) zinc finger CCCH domain-containing protein 14 isoform X1
  KO
K18753  butyrate response factor
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pop03019]
    18099442
Messenger RNA biogenesis [BR:pop03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     18099442
SSDB
Motif
Pfam: zf-CCCH zf-CCCH_DUS3L zf_CCCH_4 zf-CCCH_4 zf-CCCH_UNK Scaffolding_pro zf-CCCH_2 zf-CCCH_PARP12 Torus zf-CCCH_12 DEF265 YabA Lustrin_cystein LIC4_C
Other DBs
NCBI-GeneID: 18099442
NCBI-ProteinID: XP_006383398
UniProt: A0ACC0RS44
LinkDB
Position
17:12599507..12602359
AA seq 338 aa
MEITQPPPSGSKPATQTAAQSPPFDYHQANDQDQFASNFTSLYLSIFPPKPLLLPNSLSF
TPSTTASPTSSSAADEIATENRLRQARLILEYQDLCDHYNVSLSRLQTLTNELELIRQEN
ADLRVANSELLKLINLSSQAAAMQHQGRAFGISRDVAIERRNSVNNVERERVTLPKSISV
RSSGYVKVNQAVSGNVSTNGGGRDGASSNSSRSRVASQLDQLVSGSCMQMQQRVYVPGGG
GGKRSEEEIAAGMELEVFNQGMWKTELCNKWQETGTCPYDNNCQFAHGIGELRPVIRHPR
YKTQACRMVLAGGVCPYGHRCHFRHSLTDQDRLLLGPR
NT seq 1017 nt   +upstreamnt  +downstreamnt
atggagataacacaaccaccaccgtccggttcaaaaccggcgacgcaaacagctgcacaa
tcaccacctttcgattaccaccaagcaaacgatcaagatcagttcgcgtccaatttcacc
tctctctacctctcaatcttcccgccaaaacccttgctgctcccgaactcgctctccttc
actccctccaccaccgcctcccctacctcctcctccgccgccgatgagattgccactgag
aaccgcctccgccaagctcgactgattctcgagtaccaggacctctgcgatcactacaat
gtctctctctcgcgcctccaaaccctaactaatgaacttgagttgattcgtcaagagaac
gcggatctcagagtcgcaaatagtgagctcctcaagcttatcaatctctcttctcaggcc
gcggcgatgcagcatcagggcagagcttttggaatcagccgtgatgttgccattgagaga
aggaacagtgttaataatgtcgagagagagagggtgacgttgccgaagagcatttccgtc
agatctagtggttacgtgaaggtgaatcaagcggtttctggtaatgtgagcaccaatgga
ggcggtcgcgatggtgcaagtagtaactcgagtcggtctcgtgtggcgagtcagctcgat
caactcgtttctggatcgtgtatgcagatgcagcagagggtgtatgtgccaggaggagga
ggggggaagagatcagaggaggaaatagctgctggaatggaattggaggtgtttaatcag
gggatgtggaagacagagctgtgcaacaagtggcaagagacaggcacgtgtccttacgat
aacaattgccagtttgctcatggcattggcgagctacgtccagtaatcagacacccgaga
tataagactcaagcttgccgtatggttctcgctggaggggtttgtccttatggacacaga
tgccactttcgccactctctcactgaccaagacaggttactactgggtcctcgttga

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