Populus trichocarpa (black cottonwood): 18099621
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Entry
18099621 CDS
T01077
Name
(RefSeq) exocyst complex component SEC5A isoform X1
KO
K17637
exocyst complex component 2
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
18099621
Membrane trafficking [BR:
pop04131
]
Exocytosis
Tethering complex
Exocyst complex
18099621
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec5
Dor1
VPS51_Exo84_N
Motif
Other DBs
NCBI-GeneID:
18099621
NCBI-ProteinID:
XP_006383621
UniProt:
A0A2K2AIZ0
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Position
5:19877462..19888709
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AA seq
1103 aa
AA seq
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MSSDSDDDDELLQMALKEQAQRDLNYQGPSSNQRKPVVNFLQQPRQQPPPQRPSSTTNMA
NQPQQPKNRRAVEEEDDSEVEMLSISSGDEEVSKDRGGEGGAAERGRAGRGSGGREEESG
WDGEEPDCWKRVDEAELSRRVRDMRESRTVPVAQKFERKPSAVARKGLITLQSFPRGMEC
IDPLGLGIIDNKSLRLIADSSESSPSKSDKDHLDNNLREKLLYFSENFDSKLFLSRIHQD
TSAADLEAGTLALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLRRIEEDPEGSG
TSHLFNCMQGVSLLANRAFEPLFERQAQTEKIRSVQGMLQRFRTLFNLPSTIRGSIGKGE
YDLAVREYKKAKSIALPSHVNVLKRVLEEVEKVVNEFKGTLYKSMEDPQIDLTNLENTVR
LLLELDPESDPVWHYFNVQNHRIRGLLEKCTLDQEARMETLHNEMRERAFSDAKWRQIQQ
NVNQSSDVNYLTLGNIPLSVDSQPVDLTGEEVDALRGKFIRRLTAVITHHIPAFWKVALS
VFSGKFAKSSQVSAESNVNASATKSKEKIGDGRYSNHSLDEVAGMIRGTISAYETKVHNT
FRDLEESNILRSYMSDAIKEISKACQAFEVKESAPSTAVMALRTLQAEMTKIYILRLCSW
MRTTAEEISKEETWIPVYILERNKSPYTISFLPLAFRSVIASAMDQTSQMIQSLRSEAGK
SEDMFALLQEIEESVRLTFLNCFLYFAGHLEQIGSELALNKSSKESLHLQNGYSHESEEK
SSSDLEGSIVDSHQQLLLVLSNIGYCKDELSYELFNKYKTIWSQSRGKDEEDSDIQDLVM
SFSGLEEKVLAQYTFAKANLIRTAAMDYLLNSGVQWGAAPAVKGVRDAAVELLHTLVAVH
SEVFACAKPLLDKTLGILVEGLIDTFLSLYDENKSKDLRSLDANGFCQLMFELEYFETIL
NPYLTPDARESLKSLQGMLLEKATENVTETVENPGHQRRSTRGSEDALADDRQQGMTVSP
DDLIALAQQCSSELLQSELERTRINTACFVESIPLDSVPESAKAAYSYRGSMDSSRNFMD
SPGRNHRGTQAMGSPSFSRHRRR
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcgatagcgacgatgacgacgagcttctccagatggcgttaaaggaacaagct
caacgcgatctcaactaccagggaccgtcgtcgaatcagcgcaagccggtggtcaatttc
ctccagcaaccgaggcaacagcctccaccgcagaggccgtcttcgacgacgaacatggcg
aatcagccgcagcagccgaagaacaggagagcggtggaggaggaggatgattcggaggtg
gaaatgctgagcatatcgagcggagatgaggaggttagtaaggatcgtggcggtgaagga
ggtgcggcagagagagggagagctggacgtggcagcggagggagggaggaggagagtggg
tgggatggagaagagcctgattgttggaaaagagttgatgaagctgagctttctcgtagg
gttcgtgacatgcgagagtcgagaactgtaccagtggctcaaaagtttgagcggaagcct
tcggcagtggctagaaaggggcttatcactctgcaatcatttccccgtggcatggaatgc
attgatccacttgggttagggattatagataacaaatcattgaggttgatcgctgattca
tcagaaagctctccatcaaaatctgataaagatcatttggacaataaccttcgtgagaag
ctgttgtatttctctgaaaactttgactcaaagctattcctatcccgaatacatcaagat
acaagcgcagcagacttggaggctggcacacttgctttgaaaactgatctcaaaggacgg
actcaacagagaaaacagttggttaaagacaattttgactgttttgtctcttgcaagact
acaattgatgatatagaatcaaaactgagacggattgaagaagatcctgaaggttctggg
acttctcacctgtttaactgcatgcaaggagtaagcttgctggccaatcgtgcttttgag
cctctatttgagagacaggcccaaactgagaagataagatccgtgcaaggaatgcttcag
agattccgaacactgtttaacttgcctagtacaattcgtgggagcattggtaagggcgaa
tatgacttggcggttagggaatacaagaaggcgaagtcaattgctctaccctctcacgta
aacgtactaaaacgtgttcttgaagaggttgaaaaggtggtaaatgagttcaaaggcaca
ctttacaagtctatggaagatccacaaatagatcttacaaatcttgagaacacagtgaga
ctgttgttggagctggaccctgagtcggatcctgtgtggcattattttaatgtgcagaat
cacagaattcgaggattgcttgagaagtgcaccttagatcaagaagcaagaatggaaact
ttgcataatgagatgcgtgaaagagctttctctgatgcaaagtggaggcaaattcaacaa
aatgtgaatcaatcttcagatgtgaactatctcaccctggggaacatccctctgtcagta
gattcccagccagttgatttgactggtgaagaagttgatgctcttagaggaaagtttatc
agaaggttgactgctgtgattacacatcacataccagctttttggaaagttgctctctct
gttttcagtgggaaatttgcaaagtcttcccaagtttctgctgaatcaaatgttaatgct
tcagcaactaaaagcaaggaaaagattggagatgggaggtactctaatcattctctcgat
gaagttgctggtatgatacgaggtaccatatctgcatatgaaactaaggttcataacact
ttccgtgatcttgaagaatcaaacattctccggtcttatatgagtgatgctataaaggaa
atatctaaggcctgccaagctttcgaagtgaaagaatcagctccatctactgctgtgatg
gcacttagaacccttcaggcagagatgacaaagatttacatacttaggctttgctcttgg
atgcggacaacggcagaagagatatcaaaagaagaaacttggattccagtatatattctt
gaaagaaataaatctccatacacaatttctttcttgcctctagcgttccgctcagttatt
gcctctgcaatggatcaaaccagtcaaatgattcagtccttgaggagcgaggctggaaag
tcagaagatatgtttgcactgctacaagaaattgaagaatctgtccgacttaccttctta
aactgtttcctctattttgctggccatttggaacaaatcggaagtgagcttgcccttaac
aaatcaagcaaagaaagtttgcatttacagaatgggtattctcatgaatcagaagaaaaa
tcatcatctgatctcgaaggtagtattgttgattcacatcaacaattgctgttagttttg
agtaatattggatactgcaaagacgaactttcatatgagttgttcaacaagtataaaacg
atatggtcgcagtccaggggaaaggatgaagaggacagtgatattcaggatctagtgatg
tctttctctggacttgaagagaaggtccttgctcagtatacttttgcaaaggcaaatttg
atcagaacagcagctatggattatttgctgaactctggtgttcaatggggagcagctcct
gcagttaaaggtgtgcgtgatgcggcggtggagttattacacactttagtagctgtgcat
tcagaggtttttgcttgtgctaaacccctcctggacaagacacttggcattctagttgaa
ggtcttatcgatacttttctgagcctttatgatgaaaacaaaagcaaagatcttaggtct
cttgatgcaaatggcttctgtcagctcatgttcgagctggaatatttcgagaccatatta
aatccctatctcacacctgatgcaagggagtctcttaagtccttacaagggatgctgttg
gagaaagccactgagaatgtcaccgaaactgttgagaatccaggtcatcaacgcagatca
actcgtgggagcgaagatgcacttgcagatgacaggcagcaaggaatgaccgtgtctcca
gatgacttgattgctcttgctcagcagtgtagctctgagttgcttcaatcagagcttgag
aggactcgtatcaatacagcatgttttgttgagtcgattcccttggactcggtaccagaa
tcagctaaagctgcctattcctatagaggatcaatggattcctccagaaacttcatggat
tcccctggaagaaaccatagaggcacacaagcaatgggttcccctagtttctctcgtcac
aggcgtcgatga
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integrated database retrieval system
