Populus trichocarpa (black cottonwood): 18099785
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Entry
18099785 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18099785
KO
K23678
solute carrier family 66 (lysosomal lysine-arginine transporter), member 1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
18099785
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
18099785
Transporters [BR:
pop02000
]
Solute carrier family (SLC)
SLC66: Lysosomal lysine-arginine transporter
18099785
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GFIT
Motif
Pfam:
PQ-loop
DUF6198
Motif
Other DBs
NCBI-GeneID:
18099785
NCBI-ProteinID:
XP_052309436
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Position
6:1663018..1673120
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AA seq
416 aa
AA seq
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MDFFKSTMPICPQHCSRWARVYMEYCLCNMKDGVSLTLGMISVLSWGVAEIPQIVTNYKE
KSTEGLSLAFLLTWIIGDLFNVFGCMLEPATLPTQYYMAVLYTMTSTLLTAQTVYYGHIY
HRLKSNRRRLKGPVSSHSEEAGRVKQGNSDAGAQVNSADKQRNEPAAPEGTNGLSSPIPF
PTLPQKSSPERDLYYASARSLSSSHTPTVGSFLAQRTTPPSFSIRNSIEEPLLGEDVATQ
SAPNLNTKTMLCVVSVVTFLGTLNLHHSANSRLDRVFENKNQGIFIQVGRKILQTSSIMS
HENDIDGNVIGTFLGWSMAAIYMGGRLPQICLNIKRGKVEGLNPLMFVFALVGNITYVAS
ILVDSLAWSKIRANLPWLVDAGGCVLLDTCILLQFVYFRYRRRQVVEDKLQSSNGA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggattttttcaaaagcaccatgcccatttgccctcagcattgttcacgatgggctaga
gtttacatggagtattgtctttgcaatatgaaagatggggtttcattaactttaggtatg
attagtgttttgagttggggtgttgctgagatacctcaaatcgttacaaactataaggag
aaatccactgaaggactttcccttgctttcttgttgacatggattattggggatcttttc
aatgtttttggctgcatgttggaaccagctactcttccaacacagtactacatggcggtg
ttgtatacaatgaccagcacacttcttactgcacaaactgtttactatggtcacatctat
catcgactgaaaagcaatagacgacgcctcaagggccctgtctccagtcattctgaagag
gctggaagagttaaacaaggaaatagtgatgctggtgcacaagtcaacagtgctgataaa
cagagaaatgaacctgcagctcctgaaggaacaaatggtttgagttcaccaattcctttt
ccaacacttcctcaaaaaagttcccctgaaagagatctatactacgcgtcagcaagatct
ctttcaagcagccatactcccacagtaggatcctttttagcacaaagaacgactcctcca
tcgttttcgattaggaattcaattgaagagccattgcttggtgaagatgtagccacacaa
tctgcaccgaatttgaacaccaaaaccatgctatgtgtggtatctgtagtcacattcctt
ggaacacttaatcttcaccattcagcaaacagcaggcttgacagggtgtttgaaaataaa
aatcaaggaattttcattcaagtaggaagaaagattttgcagacaagtagcataatgtca
catgaaaacgatattgatggaaatgtaattggaacgttccttggttggtcgatggcagct
atttacatgggtggacggcttcctcaaatctgcctaaatatcaagaggggcaaggttgag
gggcttaatccattaatgttcgtctttgctttggttggaaatatcacatatgtagcaagc
atactagtcgatagcttggcatggtcaaagatcagagcaaacctaccatggctggtggac
gcaggaggttgtgtgctgcttgacacttgtatactgcttcaattcgtctactttcgctac
cggaggcgccaagtagtggaggacaagctacaaagctccaatggagcttag
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