Populus trichocarpa (black cottonwood): 18099952
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Entry
18099952 CDS
T01077
Name
(RefSeq) putative multidrug resistance protein isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
18099952
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
18099952
04147 Exosome [BR:
pop04147
]
18099952
04090 CD molecules [BR:
pop04090
]
18099952
Enzymes [BR:
pop01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
18099952
Transporters [BR:
pop02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
18099952
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
18099952
CD molecules [BR:
pop04090
]
Proteins
18099952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
RsgA_GTPase
AAA_29
AAA_16
AAA_30
MMR_HSR1
AAA_15
nSTAND1
DUF815
ABC_ATPase
AAA_18
NB-ARC
AAA_23
Motif
Other DBs
NCBI-GeneID:
18099952
NCBI-ProteinID:
XP_052309624
LinkDB
All DBs
Position
6:complement(5439071..5444348)
Genome browser
AA seq
1238 aa
AA seq
DB search
MAAELSRDEAKRKTSDASSGSLQTVLKQSDWMDMLLMALGSMGSVADGSSMAIIMIILCD
LMNKYSGTSVTIEEINKFALTLTYVAVGVASASFLEGFCWARTAERQTFRLRRQYLQAVL
RQDVGFFDTNQGASLASQVVSNISVNTLTIQGVLSEKIANFISNITTFITGQAAALYLSW
RLAIVAIPALLMLIIPGLVYGKLLGEVGKKIQEAYGVAGGIVEQAVSSIRTVYSYVAEER
TAKDYKNALKPALELGIKQGLMKGMAIGTVGITFAVWALQGWYGSTLVINRGAKGGNVFT
AGLCIIYGGLSLGGSLINVKYFIEANIAAARIFEMIHRVPGIDSADEQGKTISDVKGEVE
FRDIEFEYPSRPGSLVLNKFNLKVMSGQTVGLVGTSGSGKSTVINLLERFYEPLRGDILL
DGVDIKTLQLKWLRNQMGLVTQEPVLFATSIKENILFGKEDASMEEVIRAAKAANAHNFI
NKLSEKYNTLVGQMGTQMSEGQKQRISIARALLRNPKILLLDEATSALDSISEKAVQDAL
NQASIGRTTIIIAHHLSALRNADLIAVIQSGQVGEFGSHEQLIQNSSGTYAVMVKLQRTY
MNDEVLLEAEDTEDGSAFPVHDGTIRVGETPDKSLSRNSSFGMITNQQQEDDSSPNLRQL
ISMTAPEWKSTLLGCVGALGYGLIPPLNSFCLGALLAVYFENDHTEIRSQTRIYCFAFLA
FAVFTFLTNVIQHYYFGIMGEKLTERVREAVFEKILTFEIEWFDQENNSSGAICARLATD
AVMVRTLVTDRLSLLTQAVSSATLAVVLALMLSWRLALVAIALEPGVIAAVYLREMTMRI
MSKKILKAQSESSELASEAFGNHKIITAFGSQEKVLKLYDRTQVSSKKESNKQSWYAGVG
LFVSQFLTSALIAVICWYGGKLLFQKKITYKHLFQIFFILVSTGRVIAETASMTADLSKG
TSALKSVFQILQRETKMDPENPDGIKTEKINGEIEFKQVYFIYPARPKQIILRGLDLKIE
AAKFVALVGRSGSGKSTIIRLIEGFYDTLSGSIEVDGIDIMRYNLRALRSHIALVSQEPT
LFAGTIRDNIAYAKQNATEAEIIEASSIANAHEFISSLRDGYETYCGERGVQLSGGQKQR
IALARAILKNPAILLLDEATSALDVNSEKLVQEALERTMSGRTSLVLAHRLSTIQKADKI
VVIDKGRVIEEGNHSELLALGEKGAYYALVKLQQLSVI
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgagctcagtcgggatgaagcgaagagaaaaacaagtgatgcctcatctgga
tcattgcagactgtattgaagcagtcagattggatggatatgttgctgatggcacttgga
tcaatggggagtgttgcagatggatcatctatggcaataatcatgataattctctgtgac
ctcatgaacaaatacagtggtacttctgtcactattgaagagataaacaagtttgctttg
accttaacttatgttgctgttggggtggcttcagcctcctttcttgaaggattctgctgg
gcacgcacggccgaaaggcaaacctttcgacttcgcaggcaatatttacaagcagtgttg
aggcaagatgttggcttctttgacacaaatcagggtgcatcgctcgcttctcaagtagtc
tccaatatttcagttaacacacttaccatacaaggagttctttcagagaagatagccaat
ttcatttcaaacataacaacgttcatcacaggccaggcggcagcattatacctcagctgg
agactagctatagttgctattcctgcattgttaatgttgatcattccaggattggtatat
gggaagcttctaggtgaggttggaaagaagatccaagaagcttatggagttgcaggaggg
atagtggagcaagcagtgtcatcaatcaggactgtttattcctatgttgcagaggaaagg
acagccaaggattataagaatgcattgaaaccagctttagagctagggatcaaacaagga
ttgatgaaaggtatggccatcggtacggttggcattacatttgcagtttgggctcttcaa
ggctggtatggaagcaccctggttataaacagaggagccaaaggcggaaatgttttcaca
gctggattgtgtattatatatggaggactttctctgggtggttctctaatcaatgtgaag
tacttcatagaggcaaatattgctgctgctcgaatatttgagatgattcatcgtgtccca
ggaattgactctgcagatgaacaaggcaaaaccatatcagatgtcaaaggtgaagtggag
ttcagagacatagagtttgagtatccttcaagaccagggagcctggtattaaacaaattt
aatcttaaagttatgtctggccagactgttggtttggtaggcactagtggatcaggcaaa
tcaacagttataaatttgcttgagagattttatgaacctcttaggggtgatatcctcctg
gatggtgttgacataaagacccttcagctgaaatggttgcggaatcaaatggggctagta
acccaggagcctgtactttttgcaacctcaatcaaagaaaacattctttttggaaaagag
gatgcttctatggaggaggtaatcagagcagccaaagctgctaatgctcacaacttcatc
aataaactctctgaaaaatacaacactctggtgggacaaatgggaactcaaatgtctgaa
gggcagaaacaaaggatttccattgcaagggcactgttgaggaacccaaaaattcttctt
ctcgatgaagcaacgagtgcactggattcaatttctgaaaaggccgtccaggatgctttg
aatcaggcatcaataggtcgaacaactatcatcatcgcacaccacttgtctgctctccgc
aatgctgacttaattgctgttattcagtctggacaagtgggagaatttggctcacacgaa
caacttatacaaaactcaagtggtacatatgcagtaatggtgaagctgcagaggacatac
atgaatgatgaagttctgttggaagctgaagatacagaggatggaagtgcttttcctgtt
catgatggaaccattcgggttggggaaacacctgacaagtctctctctcgaaattctagt
tttggcatgataaccaaccagcagcaagaagatgacagttccccaaatttaaggcaactg
ataagcatgacagcacctgagtggaagtcaactctattaggctgtgttggagctcttggc
tatggattaattccgccattgaactcattctgtcttggtgcgcttctagcagtatacttt
gaaaatgatcataccgagataaggtctcaaacaagaatctattgctttgcattcttggcc
tttgctgtctttacttttctgacaaacgtgattcagcattactattttgggataatggga
gagaaattgacagaaagagttagggaggcagtttttgagaaaatcttgacgtttgagatt
gaatggtttgatcaagaaaacaacagcagtggggctatatgtgcaagattggccacagac
gcggtaatggtgagaactcttgtcaccgatcgattgtcattgctgactcaggcagtttca
tcagcgacattggctgttgtcttagctttgatgttgtcttggcgacttgcactagtagct
attgccctggaaccaggtgtcatagctgccgtctatcttagagaaatgacaatgcgaata
atgtctaagaaaattctcaaagcacagagtgagagtagtgagttggctagtgaggctttt
ggaaaccacaaaatcatcacggcatttggctctcaggaaaaggttctgaaactatatgac
cgtacacaggtaagctccaagaaagaaagcaacaagcaatcttggtatgcaggggttgga
ttgtttgtctcacagtttctcacaagtgcccttatagctgtaatttgctggtatggtggg
aagctgttattccaaaaaaagataacatacaagcacctctttcaaatatttttcattttg
gtgtcaacagggagagttatagcggagactgctagtatgacagctgacctatcaaaggga
accagtgcactgaagtcagtttttcagattctacaaagagagactaaaatggaccctgag
aatccagatggtatcaagacagaaaaaattaatggagaaatagagtttaagcaggtgtat
ttcatctacccagcaagaccaaaacagatcattttgaggggattagacctaaaaattgaa
gctgcaaagtttgttgcattggttggaagaagtggatctggaaaatccaccatcatcaga
ttgattgagggattttatgacacattgagtggttcaattgaagttgatggaatcgacatc
atgcgctataatttaagggctttgaggtcacatatagcgttggtaagtcaagaaccaact
ctttttgcaggaacaatacgcgacaacattgcatatgcaaaacaaaatgcaactgaagca
gagataattgaagcatcaagcattgcgaatgctcatgaatttataagctccctgagggat
ggatatgagacctactgcggagaaagaggtgtgcaactatcaggagggcaaaagcaaaga
atagcgcttgctcgagccatattaaaaaatcctgcaatacttctcttggatgaggcaaca
agtgcactagatgttaattcagagaaacttgttcaagaggcactagagaggaccatgtca
ggcaggacaagcctagttttggctcatcgattgtcgacaattcagaaagctgataaaata
gtagtcattgataaagggagggtcatagaagagggaaatcacagtgagcttcttgctcta
ggagaaaagggtgcatactatgcacttgtaaaactccaacaactttctgtcatttga
DBGET
integrated database retrieval system
