Populus trichocarpa (black cottonwood): 18099961
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Entry
18099961 CDS
T01077
Name
(RefSeq) cycloartenol synthase 2
KO
K01853
cycloartenol synthase [EC:
5.4.99.8
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00100
Steroid biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00917
Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
18099961
Enzymes [BR:
pop01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.8 cycloartenol synthase
18099961
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
Corona_3
Motif
Other DBs
NCBI-GeneID:
18099961
NCBI-ProteinID:
XP_052310059
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Position
6:complement(5874058..5896065)
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AA seq
756 aa
AA seq
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MWKLKLSEGNDPWLKSVNNHVGRQFWEFDPHLGTPEERAQVENYRNEFTKSRFLTKHSSD
LLMRFQFARENPCEMKLPMAKVRSEEEITKEVVDTTLRRSLRFYSTLQAEDGFWPGDYGG
PMFLLPGLVICLYVTGALNTILHNQHRQEMCRYLYNHQNVDGGWGLHIEGSSTMFCTVLS
YVTLRLLGEEMDGGDGSMGKARKWVLDHGGATHIPSWGKMWLSVLGVYEWSGNNPLLPEL
WLLPYLFPAHPGRLWCQCRMVYLPMSYLYGKKFVCSTTSLVLSIRREIYTIPYHQIDWDQ
TRNLCAKEDLYYPHSLLQDIVWACIHKAVEPLLTRWPFSKLRQRALDSVMQRVHYEDETT
QYVCLGPVNKVLNMLCCWVEDPNSEAYKCHLARINDYLWVAEDGMKMQGYNGSQLWDVSF
AVQAILATNFADEFAPMLKKAHNFLKNTQMRTNSSDDFNDWNRHISKGAWPFSTLDNGWP
VSDCTAEGLKARILLSRLPSDMVGEAIPADWFYDAVNVILSLQNNNGGFASYELTRSYAW
LEILNPAETFGNIMIDYQYVECTSAVIQGLKSFKKSYPGHRKKEIEACMVKAIDFIERTQ
QPDGSWYGSWGVCFTYGTWFGIKGLVAGGRTYQNSSSIRIACEFLLSKQLVSGGWGESYL
SSQDKVYTNLGGGKSHLVNTGWAMLALIEAGQAGRDPSPLHRAAKLLINSAMETGEFPQQ
EIMGVFNKNCMISYSAYRNIFPIWALGEYRNRVLLQ
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaactcaagctttcggaaggcaatgacccatggcttaaaagtgtgaataatcat
gttggtagacaattttgggagtttgatcctcatcttggaactccagaagagcgagctcaa
gttgaaaattatcgaaacgagtttacgaaaagccgtttcctaacgaaacacagttctgat
cttctgatgagatttcagtttgcgagggaaaatccatgtgagatgaagctgcctatggcg
aaagtaagaagtgaagaagaaatcacaaaggaagtggtggataccacattgagaagaagc
ttgagattctattcaactctacaggccgaggatggattctggcctggtgattatggtggc
cctatgtttcttctaccaggcttggtgatttgtttatacgtgacgggtgccttgaataca
attctgcataatcagcatcgacaagagatgtgtcgttatctctataaccatcagaacgta
gatggagggtggggattgcatatagaaggttcaagcacaatgttttgcacagttctctct
tatgtcaccctcagattgcttggggaggaaatggatggtggcgatggtagcatggggaaa
gctaggaaatgggttcttgaccatggcggagctactcacattccatcatggggaaagatg
tggctttcagtgcttggagtatatgaatggagtgggaacaatccattactaccggagtta
tggcttcttccttacctttttccggcacacccaggaaggttatggtgtcagtgtcggatg
gtatatctcccaatgtcatatttatatggaaagaagttcgtgtgttcgactacctccctt
gttctatcgattagaagagagatttatactattccctatcaccagattgattgggaccag
accaggaatctctgtgccaaggaagacttgtactacccccattccctattgcaagacatt
gtatgggcttgcattcacaaggctgtggagcctctccttacaagatggccattctctaag
cttagacaaagggctctagactctgtaatgcaacgtgtccattatgaggacgaaaccact
caatatgtttgccttggaccagtaaacaaggtactaaacatgctttgctgttgggtggag
gatccaaattcagaagcatacaagtgccaccttgccagaattaatgattatttgtgggta
gcagaggatggcatgaaaatgcagggctataatggttctcaattgtgggatgtttcattt
gctgttcaagcaatccttgctaccaattttgctgatgaatttgctccaatgcttaagaaa
gcacacaatttcttgaaaaacacacagatgaggacgaacagctctgatgattttaacgat
tggaatcggcacatttctaagggagcatggccgttctccaccctcgacaacggttggcca
gtatccgattgtaccgcagagggcttaaaggcaagaatcttattatctcggttgccatca
gatatggtgggagaagcgataccagcagattggttctatgatgctgttaacgtgatttta
tctctgcagaataataatggaggttttgcatcgtatgagctgacaagatcatacgcatgg
ttagagatactcaatccagctgaaacatttggaaacatcatgattgactatcagtatgtg
gaatgcacttctgcagttattcaaggactcaaatccttcaagaaatcttacccaggacat
cgaaagaaagaaatagaagcatgtatggtgaaggcaattgacttcattgagcgcacacaa
caacctgatggttcatggtatggatcttggggagtctgcttcacgtatggaacatggttt
ggaataaaggggcttgtagctggtggaaggacctatcaaaacagcagtagtattcggata
gcctgtgaattcttgctatcgaaacagcttgtttcaggtggttggggtgagagctatctt
tcaagtcaagataaggtgtacacaaatttaggtggtggtaaatcacatcttgtaaacact
ggatgggcgatgctggctcttattgaagctggacaggccggaagagatccgagcccgttg
catcgtgcagccaagttgttgattaattcagcaatggaaactggagagttcccgcagcaa
gaaatcatgggagtcttcaacaagaactgtatgattagttactctgcctacagaaacatc
ttccctatttgggccctcggagagtatcgcaatcgcgtgttgctgcagtaa
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