Populus trichocarpa (black cottonwood): 18099970
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Entry
18099970 CDS
T01077
Name
(RefSeq) histone H2A
KO
K11251
histone H2A
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
18099970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
18099970
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
18099970
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
18099970
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
18099970
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_H2A_C
Histone
CBFD_NFYB_HMF
YihI
Motif
Other DBs
NCBI-GeneID:
18099970
NCBI-ProteinID:
XP_006381182
UniProt:
A9PDX1
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All DBs
Position
6:6105551..6106705
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AA seq
149 aa
AA seq
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METGGKVKKGAAGRKGGGPKKKPVSRSAKAGLQFPVGRIGRYLKKGRYSQRVGSGAPVYL
AAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNI
NPVLLPKKTEKAAKEPKSPSKATKSPKKA
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atggagactggtggaaaggtgaagaaaggagcagcagggaggaaaggaggcggtccaaag
aagaaaccggtgtcccgctccgccaaagccggtcttcagttccctgttggtcggatcggt
cgatacttgaagaaaggccgttactctcaacgtgttggatccggagctcccgtctacctt
gccgctgtgcttgagtatcttgctgctgaggttttagagctagctggaaatgcagcaagg
gataacaagaagaacaggataataccaaggcatgtgttgttggctgtgaggaatgatgaa
gaacttggaaagctacttgcaggtgtgaccatagctcatggcggggtgttgcctaacatc
aatcctgttcttttgcctaagaaaaccgaaaaggcagccaaagaacccaagtcaccttcc
aaggccaccaagtccccgaagaaggcttag
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