Populus trichocarpa (black cottonwood): 18100028
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Entry
18100028 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18100028 isoform X1
KO
K22184
bromodomain-containing protein 9
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
18100028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
18100028
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
18100028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
DUF7877
rve_3
Motif
Other DBs
NCBI-GeneID:
18100028
NCBI-ProteinID:
XP_024459123
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All DBs
Position
6:complement(8695981..8701191)
Genome browser
AA seq
741 aa
AA seq
DB search
MKSRRMFREGHRRSPRISALDVWKAQPLSRTTVAKKTRLSRSITSTSTSTVAKVQDKELE
QQKENQPEGPACRTRAKKKRKLKPLQDVASTPNAQQEPKSSDESDERELSQKDHPINSDE
AILQKKDGPKQKGQAHSPDQPSSFSCTSWVPEKRILEHIVDILQRRDTHEIFAEPVDPNE
VEEYYEIIQEPMDFGTMRAKLHEGMYKSLEQFEHDVFLISGNAMHFNSSSTIYFRQARAI
AELAKKVFHVLKTDPDNFELEFSGTRRRSGRRPQHEVKGSTYSPSLKVARSSKSSNTNTA
VHVSPKPTPCLTSCSSSLKRAIRVNSACLGITTHSDARDDEVLFGSGDGKRFGFSETDRR
STYKPWMSFLDESYPIISSIYSNSKPLVHVNQQEIAYHKSLFLFVKDVGPTAQMVAKRKL
DGWPTTAANFPTPGSNFWLQSPNCQTSAASTSAQCPPTLDATITAACQNVSRGDRIDMFD
VDKGGVAYAGNDFGIHGTSEKVAPNGNCYSNFGSISSDASFCNDTDVASVSRNEKPRQNQ
NRGLQQGSYSPVADARDLNLLAAGSSKKDNGSAMHKLERSKMDNKSQPSDSGFKGVRSNA
LESRLSDTYSLSPSSWPLKTTGMSSFNRHIGNTHSPSTQCLRGDDQAPAAQVPNHGLGSS
SETIQDLKPSEQLTPVSGHFIFDLPFFKTQLDQINSPEQNRFLQHGSGMQGSFPNRIGET
YNDSRPHSSLNTQHTNLALQL
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtaggagaatgtttagagagggacacaggaggagtcctaggatatctgctttg
gatgtgtggaaggctcagccactgagtaggaccactgttgctaaaaaaactaggcttagt
aggagcattacaagcactagtaccagtactgttgctaaggtacaagacaaggagttggag
cagcaaaaggagaaccaacctgagggtccagcctgtaggacaagggcaaagaaaaagagg
aagcttaaaccacttcaagatgtggcttctactcccaatgctcaacaggagcccaagtca
agtgatgaatcagatgaaagagaactaagtcaaaaagatcatccaatcaatagtgatgaa
gccattttgcagaaaaaagatggcccaaaacagaaaggacaagctcattctccagatcaa
ccatctagtttttcatgtacatcatgggtgccagaaaaacgaatacttgagcatatcgtt
gacatattacagaggagagatacccatgaaatatttgcagaaccagttgacccaaatgag
gttgaggagtattatgaaatcatccaagagcctatggatttcggcaccatgagggctaaa
cttcatgaaggaatgtataaaagtcttgaacaatttgagcatgatgtgtttctaatatcc
ggaaatgcaatgcacttcaattcctcttccaccatttatttcagacaggctcgtgccata
gctgaattagctaagaaggttttccatgttctgaaaactgatcctgataattttgaactg
gaattctcggggacaagacgacgaagtggtagaaggccccaacatgaagtcaagggttca
acttatagcccatcccttaaggttgcgaggagttcaaaatccagcaataccaatactgca
gttcatgtatccccgaaacccaccccatgtttaacaagttgttcatcaagtctaaaaaga
gcgatccgagtgaactctgcatgcttgggcatcactacgcattctgatgcaagagatgat
gaagtactttttggttctggagatggtaaaagatttggtttttctgaaacagataggcgc
tctacatataagccatggatgtcgttccttgatgagagctatccaattatttcatcaatt
tatagtaattcaaagccactagtgcacgtgaatcagcaggaaattgcctatcataaaagc
ttattcttgtttgttaaagacgtaggaccaactgcccaaatggttgccaaacgcaagtta
gatggatggccgactaccgctgccaattttccaactccaggttcaaacttttggcttcag
tctccaaactgtcaaacttctgcggcatcaacctctgctcagtgtccacctactcttgat
gctacaatcacagctgcatgccaaaatgtaagccggggtgacagaatagacatgtttgat
gtcgataaaggaggtgttgcttatgctggtaacgactttggcattcatggaacttcagag
aaagtggcaccaaatggtaattgttacagtaactttggttccattagcagtgatgcttcc
ttttgtaatgacacggatgttgccagtgtctcaaggaatgaaaagcctcgccaaaatcaa
aatagaggccttcaacagggttcatattctcctgtcgctgatgccagagatctgaatctt
ttagctgctggttcaagtaaaaaggataatggatcggcaatgcataaactggagagaagc
aagatggataacaaatcacaaccatcggattcaggtttcaagggtgttaggtcaaatgct
ttggaaagcaggttgagtgatacttacagtttatcaccatcttcatggcccctaaagacc
actggcatgtcaagttttaatcgacatattggcaatacacatagtccaagtacacaatgt
ctgagaggtgacgatcaagccccagctgctcaagttccaaatcatggacttggcagttcg
tccgagacaattcaggacttgaaacctagcgaacaattgacacctgtttctggccatttc
atctttgatctgccattttttaagacacagcttgaccagataaattctccggagcagaat
agatttttgcagcatggttcaggtatgcagggatcttttccgaacagaataggtgagact
tacaatgatagccgtccacactcctcgttgaatactcagcatactaacttggctctgcag
ctgtaa
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