Populus trichocarpa (black cottonwood): 18100050
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Entry
18100050 CDS
T01077
Name
(RefSeq) protein SCARECROW
KO
K27742
protein SCARECROW
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
18100050
Transcription factors [BR:
pop03000
]
Eukaryotic type
Other transcription factors
GRAS
18100050
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Gene cluster
GFIT
Motif
Pfam:
GRAS
TFIIA
DUF7465
Motif
Other DBs
NCBI-GeneID:
18100050
NCBI-ProteinID:
XP_006381294
UniProt:
B9MTQ9
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Position
6:8854831..8858802
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AA seq
847 aa
AA seq
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MAAAASYLLGRLSNDNISINNITIDNSGGSCSNIDNASTASLTSASLLTNGGNQATTIPV
IEAATGRMVRKRMASEMMEVQSTMTPLNQRLSRGNTNVYSLSISDNNNDDVIGMTRGIGA
SSFTSCSNNNINPNNLNPILYPLLNYSTMTSMLPSSTNLTAITSAGSASVSVSGFLSSTP
STNLATSCNDNQSQLPAVCGFSGLPLFPPERERNIVRSNAVPPPGLITTSSASTPTPPSM
EDAAPATAWIDGIIKDLLHSSTNVSVPQLIQNVREIIYPCNPNLASLLEYRLRSLTDPII
PANIYPVERRRNKEAAAVPLPFQRNYIQGHAPSGLSLDLDHVSNSALPPVSSHVVSHYSN
WGPTPPLICQPNIQQQHQQPQAHLVHDQQQQESPSSTSNVTPTILALNQGHPPQQAQDQQ
QEKSSSAETQVASSTPPPSSSVAASRDKKEEMRQQKRNEEGLHLLTLLLQCAEAVSADNF
EEANKMLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYATLPSMPQSHTQKMAS
AFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGP
PYVRLTGLGTSTEALEATGKRLSDFANKLGLPFEFIPVAEKVGNLNPERLNVSKSEAVAV
HWLQHSLYDVTGSDTNMLYLLQRLAPKVVTVVEQDLSHAGSFLGRFVEAVHYYSALFDSL
GASYGEESEERHVVEQQLLSREIRNVLAVGGPSRSGDVKFHNWREKLQQSGFKCISLAGN
AANQANLLLGMFPSDGYTLAEDKGTLKLGWKDLCLLTASAWRPFHVSIETATTTINHHHH
HHRFVTA
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcggcctcgtatttactcggtagacttagcaacgacaacattagtatcaat
aacatcaccattgataatagcggtggcagctgcagcaacatcgacaacgccagtactgct
tcattgacaagtgcctccttgcttaccaacggcggcaaccaagcaacgacaataccagta
atagaagcagcaactggaaggatggtgaggaagaggatggcttcggagatgatggaagtg
caatcaacaatgactcctctaaatcagaggttatctcgtggtaacaccaacgtctattca
ctttcaatatcagacaataataatgatgatgttattggtatgactagaggtatcggtgcc
tcttcttttactagttgttctaacaacaatattaaccctaataacctcaacccaatctta
tatccactcctcaactactccactatgacttctatgttaccttcttccacgaacttgaca
gctattacatcagccgggtctgcttctgtgtccgtttctgggtttttatcctctacgcca
tcgaccaacttagccactagctgtaatgacaaccaatcccaactcccagccgtatgtggt
ttctctggtctgcccttgttccctcctgaaagagaaagaaacattgtccgttcgaacgcc
gtccctccacccggccttatcactaccagctctgcttctacccctacgcctccttctatg
gaagatgccgcacccgccactgcctggattgatggcatcataaaggacctgctccacagt
tccaccaacgtgtccgttcctcagctcattcagaatgtgagggagattatctacccttgc
aaccccaatctagcctcccttctcgagtacaggctccggtccctgacagacccgataatc
ccggccaatatttacccggtggagaggagaaggaataaggaggcagcagcagtgccattg
ccgtttcagaggaattatattcaagggcatgccccttccggcctctctcttgatcttgat
catgtctccaattccgctcttcctccagtttcttcacatgttgtaagtcactactctaac
tgggggccgacgccacctctcatttgccaaccaaacatccaacagcaacaccagcagcca
caagcccaccttgttcatgatcagcaacagcaagagagtccatcttcaacttccaatgtt
acaccaactattctagcattaaatcaaggacatcctccacaacaagcacaagatcagcag
caggaaaaatcatcatctgcggagacacaagtagccagtagcacacctcctccctcttca
tcagtagctgccagccgagataagaaagaggagatgcggcagcaaaagagaaacgaagaa
ggcttgcaccttctgaccttgctcctccaatgcgcggaggctgtctcagctgataatttt
gaggaagctaacaagatgctacttgagatctcggagctgtccacgcctttcggaacttca
gcgcagcgtgtggctgcgtacttctcagaggctatgtcagcgaggctggtcagctcatgc
ttggggatatacgcgacgcttccttcgatgcctcaaagccatacccagaagatggcttcg
gcctttcaggtgttcaatggaattagcccttttgtcaagttctctcatttcacagcaaac
caagcgattcaagaagcttttgaaagggaagagagagttcacatcatagatctggacatc
atgcaaggtttgcagtggcctggcctatttcatatcctagcatctaggcccggtggacca
ccatatgtccgcttgacggggctggggacttccacggaggctcttgaagcaactgggaaa
cgtttgtctgactttgcaaacaaactgggacttcccttcgagttcattccagtggccgaa
aaagttggaaatttgaacccagagaggcttaatgttagcaagagtgaggctgttgccgtc
cactggttgcaacactcgctctacgatgtcactggttccgatacaaatatgctttatctg
ctgcaaaggttggcaccaaaagtagtgacagtggtggaacaggacctgagccatgcggga
tccttcctgggaaggtttgtggaggccgtacattactattccgcactgttcgactccttg
ggagcaagctacggggaagagagcgaggagaggcatgtagtggaacagcagttgctatcg
agagagatacgcaatgtattggctgtgggagggccttccagaagtggggatgtcaagttc
cacaactggagggaaaagcttcaacagtctgggttcaaatgcatctctcttgctggaaat
gctgctaaccaggccaatttgctacttggcatgtttccctctgatggttatacattagca
gaggataagggcaccctcaagcttgggtggaaagacctttgcttgctcaccgcttcagcc
tggagacctttccatgttagtattgaaactgctactaccaccatcaaccaccaccaccac
caccaccgctttgtcacagcctag
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