Populus trichocarpa (black cottonwood): 18100052
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Entry
18100052 CDS
T01077
Name
(RefSeq) probable galacturonosyltransferase 7
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00520
Amino sugar and nucleotide sugar metabolism
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
18100052
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pop01003
]
18100052
Enzymes [BR:
pop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
18100052
Glycosyltransferases [BR:
pop01003
]
Polysaccharide
Structural polysaccharide
18100052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
TPR_AP5Z1
DUF3461
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
18100052
NCBI-ProteinID:
XP_024459956
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Position
6:complement(8862395..8869488)
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AA seq
614 aa
AA seq
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MKGYHNNHNQGKRRWRCLVIGVLFLVLLSMLVPLVFLLGLYHNGFHSTGHPSDPQTSSSA
SYTDQSNHVKQLIENFAPSLPNIHQVINFTSGAENKTTSSGSIHGAPAVPPAVPQPPLRR
NNAVTTGTDEITKHKRSAFEESEKCELRFGGYCHWCDEHRESMKDFMVNKLKDQLFVARA
YYPTIAKLLSQEKLTNEMRQNIQELERILSESSTDADLPPQIQKNLQKMENVIAKAKTFP
VDCNNVDKKLRQILDLTEEETNFHMKQSAFLYQLAVQTMPKGLHCLSMRLLVEYFKSSVH
DKELPLSERYSNPSLQHYVILSTNVLAASVVINSTAVHARESGNLVFHVLTDGLNYFAMK
LWFLRNTYKEAAVQVLNVENVTLKYHDKEALKSMSLPLEYRVSFHTVNNPPATHLRTEYV
SVFSHTHYLIPSIFEKLKRVVVLDDDVVVQRDLSDLWNIDMGGKVNGALQLCSVQLGQLR
NFLGKGSFDENSCAWMSGLNVIDLVRWRELDLTKTYWKLGQEVSKGTGSAEAVALSTSLL
TFQDLVYPLDGVWALSGLGHDYGIDVQAIKKAAVLHFNGQMKPWLELGIPKYKQYWKRFL
NRDDLFLGECNVNP
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggctatcataataatcacaatcaagggaaaaggcgatggaggtgtctggtgata
ggcgtgctgttcctggtgctgctttcaatgctcgttcctctcgtcttcttgcttggcctt
taccacaacggctttcactccaccggacacccctctgatccacaaacttcttcttctgct
tcgtatacagatcagtcaaaccacgtgaagcaacttatcgagaattttgcgccatctctt
cctaatattcatcaagttataaactttacaagtggagcagaaaataagaccacaagttca
ggttctattcatggtgctcctgcggtacccccagctgtacctcaaccacctctcaggaga
aataatgctgtaactactggtacagatgaaatcaccaagcacaaaagaagtgcatttgag
gaaagtgaaaaatgtgagctcagatttggaggctattgccattggtgtgacgagcataga
gaaagtatgaaggattttatggtgaataaattgaaggaccagctttttgtggctagagca
tattatcctactattgcaaagcttctatctcaagagaagttaactaatgaaatgagacaa
aatattcaagaactggagcgtattcttagtgaaagctcaactgatgctgatcttccacca
caaattcagaagaacttacagaagatggaaaatgtgatagccaaagctaaaacattccct
gtggattgtaacaacgttgacaagaaattgagacagatacttgatctaaccgaggaagaa
actaactttcacatgaagcagagtgctttcctttatcaacttgcagtgcagaccatgcca
aagggtctccactgcctctctatgagactgctcgtggaatattttaaatcttctgtacat
gataaggagctccctctgtctgaaagatattcaaatccatcgttgcaacactatgttata
ttgtccacaaatgtacttgctgcttcagttgtaatcaactccactgctgtgcatgcaaga
gaaagtgggaatctggtttttcatgttctgacagatggactgaattattttgcaatgaaa
ctatggttcctaagaaatacttacaaggaagctgctgtccaagttttgaatgttgaaaat
gttaccctgaaatatcatgataaagaggctctgaaaagcatgtctctgcctttggagtat
cgtgtgtctttccatactgttaataatccaccagccactcatttaagaacagaatatgta
tctgttttttctcatactcactatctcattcctagtatatttgagaagttgaagagagtt
gtagttctggatgatgatgttgtagtccagcgggacttgtctgacctatggaacatcgac
atgggagggaaagtaaatggtgctttacagttatgttcagtgcagttgggtcagctaaga
aattttctgggaaaaggcagttttgatgaaaactcatgtgcttggatgtccggattaaat
gttattgatctggttaggtggagagagctagatcttactaaaacttattggaagctggga
caagaggtaagcaagggaacaggatctgctgaagccgttgcattgagcacaagcttgctt
acctttcaagacctagtatatcctcttgatggtgtatgggctttgtctggactgggtcat
gactatgggattgatgtccaagccattaagaaggctgcagtgttgcactttaatggacaa
atgaaaccatggcttgagctaggaattcccaagtataaacagtactggaagaggtttctc
aaccgagatgatctattcttgggtgagtgcaatgtgaatccataa
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