Populus trichocarpa (black cottonwood): 18100094
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Entry
18100094 CDS
T01077
Name
(RefSeq) threonine dehydratase biosynthetic, chloroplastic
KO
K01754
threonine dehydratase [EC:
4.3.1.19
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00260
Glycine, serine and threonine metabolism
pop00290
Valine, leucine and isoleucine biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01200
Carbon metabolism
pop01230
Biosynthesis of amino acids
Module
pop_M00570
Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
18100094
00290 Valine, leucine and isoleucine biosynthesis
18100094
Enzymes [BR:
pop01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.19 threonine ammonia-lyase
18100094
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Gene cluster
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Motif
Pfam:
PALP
Thr_dehydrat_C
PAZ_4
Motif
Other DBs
NCBI-GeneID:
18100094
NCBI-ProteinID:
XP_006381341
UniProt:
U5G6J7
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Position
6:complement(9287888..9292317)
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AA seq
614 aa
AA seq
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MEALRLQPPQGPPLLRPSRSRLPSQILTRPHYNPNKSIKPFINATLSKPAAEIPPLSTSS
STSHDNPLRSSMLSSPPYPAKKVSANSLQYPSGYLGAVPERTVNDGDNESIINAMEYLTN
ILSSKVYDVAIESPLQLAPKLSERLGVKVWLKREDLQPVFSFKLRGAYNMMAKLPKEQLQ
RGVICSSAGNHAQGVALAAKRLGCDAVIAMPVTTPEIKWQSVERLGATVVLVGDSYDEAQ
TYAKKRAKEEDRTFIPPFDHPDVIMGQGTVGMEIVRQMQGPLHAIFVPVGGGGLIAGIAA
YVKRVNPEVKIIGVEPSDANAMALSLHHGQRVMLDQVGGFADGVAVKEVGEETFRLCKEL
VDGVVLVSRDAICASIKDMFEEKRSILEPAGALALAGAEAYCKYYGVKGANVVAITSGAN
MNFDKLRVVTELANVGRQQEALLATVMPEVPGSFKHFCELVGPMNISEFKYRSNSEKDAV
VLYSVGLHTAFELEAMKKRMESSQLRTYNLTASDLVKDHLRYLIGGKLNVPDEVLCRFVF
PERPGALMKFLDSFSPRWNISLFHYRGQGETGANVLVGIQVPQSEMDEFCSRANSLGYDY
VVVTDDNDFHLLMH
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggaggctctccgtctacagccaccacagggaccaccactcctccgcccaagccgctcc
agattgccctcacaaatcctcactagaccccactacaaccccaacaagtcaatcaagccg
ttcatcaatgccaccctatcaaaacccgccgcggagatccctccattgtcaacttcatca
tctacctcccacgacaatcccttacgctcctccatgctttcttcacctccatatcccgca
aagaaagtctctgcaaattctctgcaatacccgtccggttacttgggtgccgtaccggaa
cgtactgttaatgatggcgataatgagagtataataaatgcaatggagtatttgacgaat
atactgtcgtcaaaggtgtatgacgttgcgattgaatctcctttgcagctggcgcctaag
ctctctgagagattaggagtcaaggtttggctcaagagagaggatttgcagccggtcttt
tcatttaagctgcgtggagcttacaatatgatggcaaaacttccaaaggaacagctgcaa
agaggagttatctgctcatcagctggaaatcatgcccaaggtgttgcattagccgccaaa
agactaggttgcgatgctgtgattgcaatgcctgttactacacctgaaattaagtggcaa
tctgttgagaggttgggtgcgacagttgttctagttggggattcttatgacgaagcacag
acatatgctaaaaagagggccaaagaagaggatcggacattcatacctccttttgatcac
ccagatgttatcatgggacagggaactgttgggatggaaattgtacgtcaaatgcaaggt
ccgttgcatgcaatctttgtgcctgtgggtggcggcggcttaatagctggtattgctgca
tatgtaaagagggtaaatcctgaggttaagatcattggtgtggaaccctctgatgcaaat
gctatggcattgtctctacatcatggtcagagagtgatgctggatcaggttggaggtttt
gcagatggtgtggctgttaaagaggttggagaagaaactttccgcttatgcaaggaattg
gtagatggtgtagttctcgtgagccgtgacgctatttgtgcgtcaataaaggacatgttt
gaggagaaaaggagcattctagagccagcaggtgcgcttgcccttgctggggctgaagca
tattgcaagtattatggcgtcaagggtgcaaatgttgtggcgataacaagtggggcaaat
atgaactttgataaactgagggttgtgactgaacttgccaatgttggtaggcaacaagaa
gctttgcttgcaactgttatgccagaggtgccagggagttttaaacatttttgtgaactg
gtagggcctatgaatatctctgagttcaaatatagatcgaattctgaaaaggatgctgtt
gttctatacagtgttggccttcacacagcttttgaacttgaagcaatgaagaagcggatg
gaatcttctcaactaagaacttacaatttgaccgcaagtgacttggtcaaagatcacttg
cgttatttgattggtggcaaattaaatgttccggatgaggttctttgtcgttttgttttc
ccagaaaggcctggtgcgttgatgaagtttttggattctttcagtccacgctggaacatt
agcttgttccattacagagggcagggtgaaactggtgccaatgtcctggttggcatccag
gttccacagagtgagatggacgaattctgtagtcgtgccaacagccttggatatgattat
gttgtcgtaactgatgacaatgacttccaccttttgatgcattga
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