Populus trichocarpa (black cottonwood): 18100100
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Entry
18100100 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18100100
KO
K11338
RuvB-like protein 2 [EC:
5.6.2.3
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
18100100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
18100100
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pop03037
]
18100100
Enzymes [BR:
pop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
18100100
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
18100100
Chromatin remodeling factors
SRCAP complex
18100100
INO80 complex
18100100
INO80 complex (yeast)
18100100
SWR1 complex
18100100
ASTRA complex
18100100
Cilium and associated proteins [BR:
pop03037
]
Motile cilia and associated proteins
Dynein assembly factors
18100100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
DnaB_C
RuvB_N
AAA_22
AAA_19
AAA_5
AAA_16
Mg_chelatase
Sigma54_activat
ATPase
AAA_17
SLFN-g3_helicase
Zeta_toxin
AAA_25
nSTAND3
CBFD_NFYB_HMF
AAA_7
TsaE
GvpD_P-loop
Cdc6_lid
AAA_18
bpMoxR
AAA_11
YtkA
AAA_28
DEAD
NACHT
Motif
Other DBs
NCBI-GeneID:
18100100
NCBI-ProteinID:
XP_006381348
UniProt:
B9MTL0
LinkDB
All DBs
Position
6:complement(9350842..9353292)
Genome browser
AA seq
467 aa
AA seq
DB search
MADLKLSETRDLTRIERIGAHSHIRGLGLDSALEPRAVSEGMVGQTSARKAAGIILQMIK
EGRIAGRAVLIAGQPGTGKTAIAMGMAKSLGLETPFAMISASEIFSLEMSKTEALMQSFR
KAIAVRIKEETEVIEGEVVEIQIDRPAVAGAALKTGKLTMKTTEMEGVYDLGAKMIESLG
KEKVQSGDVIAIDKPSGKVTKLGRSFSRSRDYDAIGPQVRFVQCPGGELQKRKEIVHCVT
LHEIDVINSRTQGFLALFTGDTGEIRAEVREQIDTKVAEWREEGKAEIVPGVLFIDEVHM
LDIECFSFLNRALENEMAPILAVATNRGITTIRGTNYKSPHGIPIDLLDRLLIITTQPYT
KDDIHKILDIRCQEEDVEIAEEAKALLTHIGVETSLRYAIHLITAAALACQKRKGKVVEN
EDITRVYNLFLDVKRSTQYLMEYQEQYMFSEASIVDGDEGGTSAKLP
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcagacctcaaactctcagaaactcgagatctaacaagaatcgagcgcataggcgct
cactcccacatccgcggcctggggctcgactcagccctcgagccacgcgccgtctctgaa
ggaatggtgggacagacctcagcccgcaaagccgccggcatcatcctccaaatgataaaa
gaaggaagaatcgcaggccgagccgttcttatcgcgggtcaacccggaaccggtaaaact
gcaatcgccatgggtatggcaaaatccctaggtcttgaaaccccatttgcaatgatctcc
gctagcgaaatattttctcttgaaatgtcgaaaaccgaggctttaatgcagtcttttagg
aaagcaattgctgttagaattaaagaagaaaccgaggtgattgaaggtgaagtggtagaa
attcaaattgataggccagcagtggctggtgctgctttgaagacggggaaactgactatg
aagacaacggagatggagggggtttatgatttgggagcgaagatgattgagagcttggga
aaggaaaaggtgcaaagtggggatgttattgctattgataagccttctgggaaagttacc
aagcttggtaggtctttctcgcggtcaagggattatgatgctattggaccgcaggttagg
tttgttcagtgtcctggtggggagttgcagaagaggaaagagattgtgcattgtgtcacg
cttcatgaaattgatgtcatcaatagcagaacacagggatttctggctctcttcactggt
gatactggtgaaattcgtgcagaagtaagggaacaaattgacacgaaggtggcagaatgg
agagaggaaggcaaagcagagattgtgccaggtgttctcttcattgacgaggtgcacatg
cttgacattgaatgcttctctttcctgaaccgcgctcttgagaatgagatggctccaata
ttagccgttgctaccaacagagggattactaccatacgaggaacaaattacaaatctcca
catgggattccaatagatctccttgatcgcttacttatcattactactcagccttataca
aaggatgacattcacaagattctggacatcagatgccaagaagaagatgtggagatcgct
gaagaggcaaaggcgttgttgacacatattggggttgaaacatccttgagatatgctatc
catctaattactgccgctgcattggcatgccagaaacgaaaaggaaaggttgtggagaat
gaggacattactcgagtctacaatctgtttctggatgtgaagagatcaacgcaatacttg
atggagtatcaggagcagtacatgttcagtgaagcatcaatagtagacggtgacgaaggt
ggcaccagcgccaagcttccttga
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