Populus trichocarpa (black cottonwood): 18100103
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Entry
18100103 CDS
T01077
Name
(RefSeq) vacuolar protein-sorting-associated protein 37 homolog 1
KO
K12185
ESCRT-I complex subunit VPS37
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
18100103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
18100103
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
18100103
Membrane trafficking [BR:
pop04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
18100103
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
18100103
Exosomal proteins of colorectal cancer cells
18100103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mod_r
APG6_N
GlutR_dimer
Motif
Other DBs
NCBI-GeneID:
18100103
NCBI-ProteinID:
XP_006381351
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All DBs
Position
6:complement(9371772..9374857)
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AA seq
233 aa
AA seq
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MFKFWGSQEQQGQPGPQEVAQGPAQSWYPPSVVGSPSSSRPATPTSTSSSTSHSFQSPAE
RPLSPSPAEAAAFITLLKDKSVDELRKLLSDKDAYHQFLLSLDQVKIQNNIRDELRKETL
QLARENLEKEPRIMELRNQCRIIRTTELAAAKEKLNELERQKEELLRSCSPASLLQRLQE
AMNKTDEESEALHRQFLDKEIDLGSFVLKYKKLRTTYHKRALIHLAAKASPTA
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagttctggggttctcaggaacaacaagggcagccaggtccacaagaggttgct
caaggtccagcacaatcttggtaccctccatctgtagttggttccccatcttcctcacgg
cctgcaactccaactagtactagctcttccacttcccacagtttccaaagccctgcagaa
cgcccactctctccttcacctgctgaagctgctgcctttatcactcttttgaaggacaaa
agtgttgatgaattacggaagctattgtctgacaaggatgcataccatcaatttttactc
tcacttgaccaggttaaaattcaaaataatataagagatgagcttcgcaaggaaactctg
cagcttgcgagagagaacttggagaaagagccacgcataatggagcttagaaaccaatgc
aggataatacggacaactgagctggctgctgctaaagaaaaactaaacgagctggaaaga
cagaaagaagagttgttgaggtcctgctctcctgcctccctcctgcaaaggctacaagag
gcaatgaataagacagacgaggaatctgaagccctccacaggcagttccttgataaggag
atagatcttgggtcttttgtgctgaagtacaaaaaactccgtaccacctatcacaaacga
gcacttatccatcttgcagcaaaagcatctccaactgcttga
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