Populus trichocarpa (black cottonwood): 18100146
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Entry
18100146 CDS
T01077
Name
(RefSeq) transcription factor RAX2
KO
K09422
transcription factor MYB, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
18100146
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
18100146
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Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
18100146
NCBI-ProteinID:
XP_006381399
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Position
6:9831818..9833836
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AA seq
333 aa
AA seq
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MGRAPCCDKANMKKGPWSPEEDAKLKEYLEKQGTGGNWIALPQKAGLKRCGKSCRLRWLN
YLRPNIKHGEFSDDEDRIICSLYANIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMGV
MNPIAQRKPHQAALFSSLLQATSLPSSPSTLLSSSSSSFTCSNNSYYSNLTRSFTDPISF
SSSPMSTSSFATASMLHPQETFVGPMQNDQVKDSLIMFGGEASCSSSDGSCNNQMSHVKE
EYEYSGGTNNNNEQMGLQNYLYNGVEDDQKLMVSSGAAAHGVLNGWIEKQNGLWPGDNPL
DYGLEEIKQLISTSSCNSFLFDENKTGEKVMYY
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgggaagggctccttgttgtgacaaggctaatatgaagaaagggccttggtcgcctgaa
gaagatgcaaagctgaaggagtacttggaaaaacaagggactggagggaattggattgct
ctcccacaaaaggctggtcttaaaagatgtgggaaaagctgcagattaagatggctaaac
tatctcaggcccaacattaaacatggagagttctctgatgatgaagacaggataatctgc
agcctatatgccaacattggaagccggtggtcaataatagcagctcagttgccaggcagg
acggataatgacatcaaaaactactggaacaccaagctcaagaagaaactaatgggtgtg
atgaatcctattgctcagagaaaacctcaccaagctgctcttttttcatctctccttcaa
gctacatcattaccgtcttcaccatccactctcctgtcatcatcatcatcatcattcaca
tgcagcaacaacagttattacagtaacctaactaggtctttcactgatccaatctcattt
tcatcaagtcctatgagcactagctctttcgctactgcttctatgctacacccccaagaa
acctttgtggggcctatgcaaaatgatcaagttaaagatagtcttataatgtttggaggt
gaagccagctgcagctcgtctgatgggagttgcaacaatcagatgagccatgtcaaagag
gagtatgaatatagtggtggtacaaataacaacaatgaacagatggggttacaaaattat
ctctacaatggggttgaagatgaccaaaaattgatggtttcaagtggggctgctgctcat
ggtgtacttaatgggtggattgagaagcaaaatgggttatggccgggagataacccacta
gactatggtctagaggagattaagcaacttattagcactagcagctgtaatagctttttg
tttgatgaaaacaagacaggagaaaaagtcatgtactactga
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