Populus trichocarpa (black cottonwood): 18100155
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Entry
18100155 CDS
T01077
Name
(RefSeq) transcription factor-like protein DPB
KO
K04683
transcription factor Dp-1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
18100155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
18100155
03036 Chromosome and associated proteins [BR:
pop03036
]
18100155
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
18100155
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
18100155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
CENP-F_leu_zip
Filament_head
Motif
Other DBs
NCBI-GeneID:
18100155
NCBI-ProteinID:
XP_006381410
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All DBs
Position
6:complement(9915854..9922016)
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AA seq
358 aa
AA seq
DB search
MVAGGAHLEDGDRHPSSASRRGGGGGGGGGGATTGSWVSGQSVSTSGSVGSPSSRSEHAM
ATPASDSTFLRLNHLDIHADDAATQDAAANKKKKRGQRAVGADKSGRGLRQFSIKVCEKV
ESKGTTTYNEVADELVAEFADPSNSVSTPDQQQYDEKNIRRRVYDALNVLMALDIISKDK
KEIQWKGLPRTSLSDIEELKVERLGLRNRIEKKAAYLQELEEQFVGLQNLIQRNEQLYSS
GNAPSGGVSLPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCER
PQSDDMAPNPPADGGEGSSMSSMYQPQILASPSTNTPVRHPTSPPLPGIIKARVKNEH
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggtcgctggtggggcccacctggaagatggagacaggcacccttcgtcggcctctaga
agaggaggaggaggaggaggaggaggaggaggagccaccacgggctcctgggtgtctggc
caatcggtgtcaactagcggcagcgtggggtctccatccagcaggagcgagcatgccatg
gccactcccgctagtgacagcactttcttaaggttgaaccatctcgacattcacgccgat
gatgccgccactcaagatgccgccgctaataagaagaaaaagagaggtcaacgggctgtt
ggagctgataagagtggtagaggacttcgtcaatttagcatcaaagtttgtgaaaaggtg
gaatccaaaggaacaactacttacaacgaggtagcagatgaacttgtcgcagagtttgct
gaccctagcaatagtgtttctaccccagatcagcaacaatatgacgagaaaaacatacgg
cggagggtatatgatgctctgaatgtactcatggcattagatattatatctaaggataaa
aaggaaatacagtggaaaggtcttccccgaactagcctaagtgatattgaagaattgaag
gttgagcgtcttggattgagaaataggatcgaaaagaaagctgcctatttgcaagaactg
gaggaacaatttgtaggtcttcagaacctgatacagcgaaatgaacaactgtacagctca
ggaaatgctcctagtggtggtgtgtcgttgccttttattctggtgcagacacgccctcat
gcaactgttgaagtggagatatcagaagatatgcagctggttcactttgattttaatagc
actcctttcgagctccatgatgataattatgttctcaaggcaatgaaattttgtgagaga
ccccagagcgatgatatggcacccaatccacctgctgatggaggtgaaggttctagcatg
tccagcatgtatcaaccacaaatccttgcttccccaagtacaaacaccccagttaggcat
cctacttcgccgcctcttcctggaatcataaaagcacgtgttaagaatgagcattga
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