Populus trichocarpa (black cottonwood): 18100199
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Entry
18100199 CDS
T01077
Name
(RefSeq) T-complex protein 1 subunit beta
KO
K09494
T-complex protein 1 subunit beta
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pop03110
]
18100199
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pop03037
]
18100199
04147 Exosome [BR:
pop04147
]
18100199
Chaperones and folding catalysts [BR:
pop03110
]
Heat shock proteins
HSP60 / Chaperonin
18100199
Cilium and associated proteins [BR:
pop03037
]
Primary cilia and associated proteins
BBS-CCT complex
18100199
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
18100199
Exosomal proteins of colorectal cancer cells
18100199
Exosomal proteins of bladder cancer cells
18100199
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5442
Motif
Other DBs
NCBI-GeneID:
18100199
NCBI-ProteinID:
XP_006381460
UniProt:
B9MTB4
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All DBs
Position
6:complement(10413806..10418740)
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AA seq
527 aa
AA seq
DB search
MAVEKIFKSEATEEKGERARLASLIGGMAVADLVKTTLGPKGMDKILQSTGRGHEVTVTN
DGATILKSLHIDNPAAKILVDISKVQDDEVGDGTTSVVVLAGELLREAEKLLAAKIHPMT
IIAGFRMAAECARNALLQKVLDNKDNEEKFMADLMKIARTTLSSKILSQDKEYFAKLAVD
AVMRLQGSTNLEAIQIIKTPGGSLKDSFLDEGFILDKKIGVGQPKRIENAKILVANTAMD
TDKVKIYGARVRVDSMSRVAEIEAAEKQKMKEKVDKIIAHGINCFINRQLIYNFPEELFA
NAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGV
EMGQACTIVLRGASRHVLDEAERSLHDALCVLSQTVNDSRVLLGGGWPEMVMAKEVDELA
RVTPGKKSHAIEAFSRALIAIPTIIAENAGLDSAELVAQLRAEHHKEGCTSGIDVISGSI
GDMVELGISEAFKVKHAVLLSATEAAEMILRVDEIITCAPRRREDRM
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgagaaaattttcaaaagtgaagctactgaagaaaaaggagagcgtgccaga
ttggcatcgcttattggtggtatggctgttgctgacttggtcaagacaactctggggcca
aaaggaatggataaaatcttacagtcgacaggcagaggtcatgaagtcacagtaacaaac
gatggggccaccatcctcaagtcccttcacattgacaacccagctgctaaaatccttgtt
gatatctctaaagttcaagatgatgaagttggtgatggaacaacttctgttgttgttttg
gcgggggaactcttgagggaggcagaaaagctgttggcagcaaaaattcacccgatgaca
ataatagcaggtttccgaatggcagcagaatgtgctcgcaatgctttgttgcaaaaggtt
ttggataacaaagacaatgaagaaaaattcatggctgacttgatgaagattgcaaggact
actttgagttccaaaatactatcacaggataaggaatactttgcaaaactggctgttgat
gcagttatgagattacagggtagcacaaacttagaggctattcaaattatcaagacgcct
ggaggttcactaaaggattccttcttagatgaaggatttattcttgacaagaaaatcggt
gttggacaaccaaagcgaatagagaatgcaaagattttggtggccaatactgcaatggat
acagacaaagtaaaaatctacggggcacgtgttcgtgtcgattcaatgtccagggttgct
gaaattgaagcagctgagaagcaaaaaatgaaagaaaaggtggataagataatagcacat
ggaattaactgcttcattaacagacaactgatttacaatttccctgaagaactctttgca
aatgctggaattcttgcaattgagcatgctgattttgatggaattgaacgtcttgcttta
gtgactggtggtgaaattgcttcaacatttgataatccagagtcagttaagcttggtcac
tgcaagcttattgaggaaattatgattggtgaggacaagttgattcacttttcaggtgtt
gaaatgggtcaggcatgtactatagtactgagaggtgcaagccgtcatgtgcttgatgag
gcggaaaggtccctgcatgatgccttgtgtgtgctgtctcagacagtcaacgacagcagg
gttctacttggaggtggatggcctgagatggtgatggcaaaggaagtcgatgaattagct
cgagtgactcctgggaagaagtcccatgctattgaagcattctcaagggctctcattgca
attcctactatcattgcagaaaatgctggtttggacagtgcagagttggttgcacagctt
cgggcagagcaccacaaggaggggtgcacatcaggaattgatgtgatatctggatctata
ggagatatggtagagctaggcatttctgaagcattcaaagttaagcatgctgtgctgctc
tctgcaactgaagctgctgagatgatccttagagtggatgaaatcatcacttgtgctcca
cgcaggagagaagatagaatgtga
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