Populus trichocarpa (black cottonwood): 18100206
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Entry
18100206 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18100206
KO
K24741
WD repeat-containing protein 20
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pop04990
]
18100206
Domain-containing proteins not elsewhere classified [BR:
pop04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
18100206
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_TEP1_2nd
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_Nup120_160
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
EIF3I
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
PP2C_2
Beta-prop_DCAF12
Cytochrom_D1
Beta-prop_Vps41
Pep3_Vps18
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
18100206
NCBI-ProteinID:
XP_024458748
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Position
6:complement(10469698..10477776)
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AA seq
548 aa
AA seq
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MINTSNGMISTSSTSANPQSPGLKTYFKTPEGRYKLHYEKTHPSGLLHYAHGKTATQVTL
ANLKDKPAPSTPTAPPSSFSASSGVRSAAARLLGGSNGSRALSFVGGNGGNKSISSSSSR
IGSLGASSSSNSMINTNFDGKGTYLIFNVGDAIFISDLNSPDKDPIKSIHFSNSNPVCHA
FDQDAKDGHDFLVGLSSGDVYSVSLRQQLQDVGKKLVGAQHYNKDGSVNNSRCMSIAWVP
GGDGAFVVAHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVSHARYSKSNPIARWHVSQG
SINGIAFSTDGTYLATVGRDGYLRVFDYLKEQLICGGKSYYGALLCCAWSMDVKYILTGG
EDDLVQVWSMEDRKVVAWGEGHSSWVSGVAFDSYWSSPNSDGTGENVVYRFGSVGQDTQL
LLWDLEMDEIVVPLRRCPPGGSPTFSTGSQSSHWDSVIPVGTLQPAPSMRDVPKLSPVLA
HRVHTEPLSGLVFRQESVLTVCREGHIKIWMRPGTSESQSGNSETILSTSLKEKPLLSSK
TGSSAYKQ
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacacaagcaacggcatgatctcaacgtcatctacatcggcgaacccgcaatca
ccgggattaaagacttattttaaaaccccagaaggacgttataagcttcactatgaaaag
acacatccttctggtctacttcactatgcccatggcaaaactgctacccaggtaacccta
gctaatctcaaggacaagcctgccccatcaaccccgacagccccaccttcaagtttcagt
gcgagcagtggtgtacgatcagctgctgctaggttgttgggtggtagcaatggaagccgt
gcacttagctttgttggagggaatggtgggaataaaagtattagtagtagtagtagtagg
attggatcattgggggcttcgagctcaagtaattcaatgattaatacaaattttgatgga
aaagggacttacttgatcttcaatgtaggggatgccatcttcataagtgatttaaattct
ccagataaggacccaataaaatccatccattttagtaattcaaaccctgtgtgccatgcc
tttgaccaagatgctaaggatggacatgattttcttgttggcttgagttctggtgatgtc
tactctgtgtcactgagacagcaattacaggatgttggaaagaagctagttggggcccag
cattataacaaagatggttcagttaataacagccgttgtatgagtattgcatgggtgcct
ggaggagatggtgcttttgttgttgctcatgctgatggtaatttgtacgtctatgaaaag
agcaaggatggtgctggtgattcttcattccctgttatcaaagatcaaactcaattctct
gtttcgcatgcccggtacagtaagagtaacccaattgccaggtggcatgtcagccaaggt
tcaataaatggcattgctttctcaaccgacgggacctatttagcaactgttggaagagat
ggttacttgcgagtttttgactatttaaaagaacaacttatatgtggtgggaaaagttat
tatggtgcccttctttgttgtgcttggagcatggatgtgaagtatattttgactggagga
gaagatgatttagttcaagtctggagcatggaagatcggaaagttgttgcttggggtgaa
ggacacagttcatgggtgagcggagtggcttttgattcatattggtcatcaccaaattca
gatggcacaggggagaatgttgtgtaccggtttggttctgttggtcaggacacacagttg
cttctatgggacctggaaatggatgaaattgtagtgccattacgcaggtgccctcctggt
ggatctcctactttcagtactggaagtcagtcttcacactgggacagtgttatcccagtt
ggtactctgcaacctgctccaagcatgcgtgatgttccaaagctttctcctgtattagct
caccgtgttcacacagaacctctttctggtttagtatttagacaggaatctgttcttact
gtatgtagagagggccatataaaaatctggatgagacctggaacctcagaaagccagtca
ggcaactctgaaaccatcttaagtaccagtttgaaggagaagccattattgtcaagcaag
actggcagttctgcatataagcaatga
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