KEGG   Populus trichocarpa (black cottonwood): 18100208
Entry
18100208          CDS       T01077                                 
Name
(RefSeq) zinc finger protein JACKDAW
  KO
K25870  zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pop03000]
    18100208
Transcription factors [BR:pop03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    18100208
SSDB
Motif
Pfam: C2CH-4th_BIRD-IDD C2H2-2nd_BIRD-IDD C2CH-3rd_BIRD-IDD zf-C2H2 zf-C2H2_jaz zf-C2H2_STOP2_C zf-met zf-C2H2_4 zf-C2H2_6
Other DBs
NCBI-GeneID: 18100208
NCBI-ProteinID: XP_006381470
UniProt: U5GCW4
LinkDB
Position
6:complement(10489859..10492372)
AA seq 512 aa
MMSGDAFSLPSSIAGFAQDQNNANPNPSPKTNPNQAAKRKRNLPGTPDPDAEVIALSPKS
LMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKEVRKKVYICPEKTCVHHDP
SRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSR
KDSFITHRAFCDALAEESARITSVPAAANLNFRNDTVDLPHGFPDRPGVPDIAGIPQFNS
GFGPDFSGMTPGNSLGADQQKPGLSLWLNQATSPISPNLNLYVPSSSSGLPEMVQMGSAN
LYGSSSTANFGNLTLSGLPHGLKEEGSSKANMVNTSASLYSDSIQNKQSKPAAVPNMSAT
ALLQKAAQMGSTRSNQSFFGNNYGLMNCSSSSPTTNPISLNQNPNELHQVFQNVKQTAAE
SLTTTNSTVAMSDAMMGTSSNLDQLMMQTSGKLQNDQTQLKHQRGSNSIESGLTRDFLGM
SSESSRPFLPQDLAKFASISSAMSLNHFTVNP
NT seq 1539 nt   +upstreamnt  +downstreamnt
atgatgtctggtgatgctttctcactaccatcttcaatagcagggtttgctcaagaccag
aataatgcaaaccctaaccctagccctaaaactaatcctaatcaagcggccaagaggaaa
agaaatttaccaggaacaccagatccagatgctgaggttattgctttatctccgaagtct
ctcatggctacaaaccggtttatatgtgaaatatgcaacaaaggatttcaaagagaccaa
aacttgcaacttcatcgaagaggtcacaatcttccatggaagctaaagcaaagaaccaac
aaagaggtacgaaagaaggtctatatttgcccagaaaagacctgcgttcaccacgatcca
tctagagctctcggagacttaactggcataaagaagcactttagcagaaaacatggggag
aagaagtggaagtgtgagaaatgttcaaagaagtatgcagttcaatcagactggaaagct
cactccaagacttgcgggactagagagtataaatgtgactgtgggactttattttccagg
aaagatagctttatcacacacagagccttttgcgatgccttagctgaagaaagtgcaaga
atcacttccgttccagctgcagccaatctaaatttcagaaatgatacagtagatttgcct
catggatttcctgaccggccgggagttccagatatcgcaggcattccacaattcaattca
ggttttggacctgatttcagtggcatgactccaggaaattctcttggtgctgatcaacaa
aagcctggactttctctgtggctaaatcaagccacttcacctattagtcccaatttaaat
ctttacgtgccttcgagttctagtggtttgcctgaaatggtgcaaatgggatcagccaat
ctctatggttcatcgtccaccgccaattttgggaatttaaccttatctggactccctcat
gggctaaaggaagaaggtagtagtaaagccaatatggtgaatacatcagcttctttgtat
tctgatagtattcagaacaagcaatcaaagccagctgcagtgcccaatatgtctgccact
gcacttctgcaaaaggcagctcaaatgggttctacaagaagcaaccaatctttctttggc
aacaattatggactaatgaactgttcttcttcttctcctacaacaaaccccatctctctc
aaccagaatccaaacgagctacaccaagtctttcaaaatgttaagcaaactgcagccgag
agcctaacaacaacaaatagtactgtagcaatgagtgatgcaatgatgggtacatcaagc
aaccttgatcaacttatgatgcaaacaagtggaaaactacaaaatgaccagactcagttg
aagcatcaaagaggttcaaattctatcgagagtggtttaacaagagattttctgggtatg
agtagtgaatccagtcgtccatttttaccacaagacctagcgaagtttgcttcaataagt
tcagccatgagcttgaaccatttcactgtcaatccttga

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