Populus trichocarpa (black cottonwood): 18100240
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Entry
18100240 CDS
T01077
Name
(RefSeq) 60S ribosomal protein L4
KO
K02930
large subunit ribosomal protein L4e
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
18100240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pop03011
]
18100240
Ribosome [BR:
pop03011
]
Ribosomal proteins
Eukaryotes
Large subunit
18100240
Archaea
18100240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L4
Ribos_L4_asso_C
Motif
Other DBs
NCBI-GeneID:
18100240
NCBI-ProteinID:
XP_006381503
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Position
6:complement(10844944..10846829)
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AA seq
408 aa
AA seq
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MAAAARPLVSVQPLPASLNEMATDSVTTVALPDVMKASIRPDIVNYVHSNISKNSRQPYA
VSKKAGHQTSAESWGTGRAVSRIPRVSGGGTHRAGQGAFGNMCRGGRMFAPTKTWRRWHR
KINVNQKRYAVVSAIAASAIPSLVMARGHRVESVPEMPLVISDSAESIEKTSTAIKVLKE
IGAYPDAEKAKDSQAIRAGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEVANV
ERLNLLRLAPGGHLGRFVIWTKSAIEKLDSIYGTFDKSSEKKKGYVLPRTKMVNADLARI
INSDEVQSVVNPIKKEVKRAPLKKNPLKNLNVMLKLNPYAKTARRMALLAEAERVKSKKE
KLDRKRKPVSKEELAAAKAAGKAWYKTMISDSDYTEFENFTKWLGVSQ
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgcccgcccccttgtctccgttcaacctctacccgcgtccctcaatgaa
atggccactgattctgtcacgaccgtggctctccccgatgtcatgaaggcctcaatcaga
ccagacatcgtcaattatgtccactccaacatctccaagaacagccgtcaaccttacgcc
gtctcgaagaaggccggccaccagacctcagccgaatcttggggtaccggtcgtgccgtt
tctcgtatcccccgtgtttctggtggtggaactcaccgtgctggtcagggagcttttgga
aacatgtgccgtggtggacggatgtttgctcctaccaagacctggcgccgctggcatagg
aagattaacgtcaaccaaaagcgatacgccgtcgtttcagctattgctgcctctgctatt
ccttctttggtgatggcacgcggtcaccgggtggagtcagtccctgagatgcctttggtt
atctctgattcggccgagagcattgaaaaaacatccactgctattaaggtgctgaaggaa
attggtgcttatccagatgccgagaaggccaaggattctcaagcgatccgggctggaaag
ggaaaaatgaggaacaggaggtacatttcccgcaagggacccctgatcgtgtatggaact
gaaggtgctaagttggtgaaggccttccgtaacattccaggagtggaggtggctaacgtt
gagaggctgaacttgttgaggctggctcccggcggtcatcttggaaggtttgtgatctgg
acaaaatcagctatcgagaagcttgattcaatatatgggacttttgacaagtcttccgag
aagaagaagggttatgttctgcctaggaccaagatggtcaatgctgatttggccaggatc
atcaactctgacgaggttcagagcgttgtgaatccaatcaagaaggaggttaagagggca
cctttgaagaagaacccactgaagaacttgaacgtgatgctgaaattgaatccatatgct
aagactgctaggaggatggcccttctggctgaagcagagcgcgtgaagtccaagaaggag
aagctcgacaggaagaggaaacctgtgtcgaaggaggagctagctgctgctaaggctgca
ggaaaggcttggtacaagaccatgatttctgacagcgattacaccgagttcgagaatttc
accaagtggcttggtgtctcccagtga
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