Populus trichocarpa (black cottonwood): 18100243
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Entry
18100243 CDS
T01077
Name
(RefSeq) DNA topoisomerase 6 subunit A
KO
K10878
meiotic recombination protein SPO11
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
18100243
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
18100243
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Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
Topo_VI_alpha
Motif
Other DBs
NCBI-GeneID:
18100243
NCBI-ProteinID:
XP_006381506
UniProt:
B9MT76
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Position
6:10861951..10863479
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AA seq
423 aa
AA seq
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MADSTSTKSRKRRQPDPDSTTELLFKNLLKPDSVILQTLQSLVISTASASSSKPLTLSDL
SLSSSCREVADLSLTSVQSEIEALTISIVQSILSGKGFSFNVPSRSATNQLYVPELDRIV
LKDKNTLRPFANISSVRKCTITARILSLIHQLCLKSIHVTKRDLFYTDVKLFQDQTQSDA
VLDDVSCMLGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGD
MQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKTELKLPVL
ALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTE
QDIKTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQQ
DWL
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggccgacagcacctccaccaaatccagaaaacgccgccaacccgacccagactccacc
accgaactcctcttcaaaaacctcctaaaacccgactctgtaatcctccaaactctacaa
tccctcgtaatctccactgcatccgcctcctcttcaaaacccctcactctctccgaccta
tcactctcttccagctgtcgagaagtcgccgacctctcccttacctctgtccaatctgag
atcgaagccttaaccatctccatcgtccaatcaatcctctccggtaagggcttctccttc
aatgtcccctcacggtctgccactaaccaactctatgtcccggaactcgaccgcattgtc
ttaaaagacaaaaataccctccgccctttcgctaacatttcatcagtccgcaaatgcaca
ataactgcaaggatcctttccttaatccaccagctttgtctaaaaagcattcatgttaca
aagcgagatttgttttacactgatgtgaagttgtttcaggatcagacacagtctgacgct
gttcttgatgatgtttcgtgtatgcttgggtgtactaggtcttctcttaacgtgattgcg
gcggagaagggggtggttgttgggagattgatttttagtgataatggggatatgattgat
tgcaccaaaatgggaatgggagggaaagcgattccaccgaatattgatagagttggggat
atgcagagtgatgcattatttattttgttagttgagaaggatgctgcatatatgaggtta
gctgaggataggttttacaatcgttttccatgtattattgtgactgcgaaagggcagccg
gatgtggctacaaggctttttttaaggaaaatgaagaccgaattgaagctgccggttttg
gcattagttgatagtgatccatatgggttgaagattttatctgtttatggctgtgggtcg
aagaatatgtcttatgatagtgcgaatttgaccacaccggatatcaaatggctggggatt
aggcctagtgatttggacaagtataagatacctgagcaatgtaggttgccgatgactgag
caggatatcaagactgggaaggatttgttggaggaggatttcgtgaagaagaatccaggg
tgggttgaggagttgagtttgatggtgaagactaaacagaaggctgagattcaggctctg
agttcgtttgggtttcagtatttatctgaggtttatttgcctttgaagttgcagcagcag
gattggctttga
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