KEGG   Populus trichocarpa (black cottonwood): 18100279
Entry
18100279          CDS       T01077                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC5
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03020  RNA polymerase
pop03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    18100279
  09124 Replication and repair
   03420 Nucleotide excision repair
    18100279
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pop03021]
    18100279
   03400 DNA repair and recombination proteins [BR:pop03400]
    18100279
Transcription machinery [BR:pop03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     18100279
  RNA polymerase III system
   RNA polymerase III
     18100279
  RNA polymerase I system
   RNA polymerase I
     18100279
DNA repair and recombination proteins [BR:pop03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      18100279
SSDB
Motif
Pfam: RNA_pol_N Chordopox_RPO7
Other DBs
NCBI-GeneID: 18100279
NCBI-ProteinID: XP_006381558
UniProt: A9PF10
LinkDB
Position
6:11205500..11207216
AA seq 71 aa
MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLL
NYNTLEKSEGS
NT seq 216 nt   +upstreamnt  +downstreamnt
atgattatcccagttcgttgttttacttgcggcaaggtgattggaaataaatgggatacg
tatcttgatcttcttcaagccgattacactgaaggagatgctcttgatgctctggggttg
gttcgttattgttgtagaagaatgcttatgactcatgttgacctcattgagaagcttctg
aactacaatactctggagaaaagtgagggcagttga

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