Populus trichocarpa (black cottonwood): 18100300
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Entry
18100300 CDS
T01077
Name
(RefSeq) auxin response factor 19 isoform X3
KO
K14486
auxin response factor
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
18100300
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Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
PB1
Motif
Other DBs
NCBI-GeneID:
18100300
NCBI-ProteinID:
XP_006381581
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Position
6:11533587..11541471
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AA seq
1134 aa
AA seq
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MKVPSNGFLPNFAEGERKCINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKE
TDFIPSYPNLPSKLICMLHNVTLHADVETDEVYAQMTLQPVSKYEKEALLASDMGLKQNR
QPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTFRH
IYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVIS
SDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVIPFSKYNKALYTQVSLGMRFRMMF
ETEESGVRRYMGTITGISDMDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPVVTP
FYIYPPPFFRPKFPKQPGMPDDDSDIENAFKRAMPWLGDEFGMKDPPSSIFPGLSLVQWM
SMQQNNQFPATQSGLFPSMVPSNALHNNLSTDDPSKVLNFQAPGLSPPSVQLNKTNPQNQ
VGQLPQPPMAWTQQQQLQQLLQTPINQQQPPYPHQQQQQPPYPHQQQQQQQPISQQQQHQ
HWPQQQQQPQLQPPQIRQPPPQIQQHQQQQQIFQPPTLNDSVVAPNQIPNQNLQQPVVYS
QLQQQQQLLASNTQSQSIPSANKSSYPLTSLPQDSQLHQQMEQQSNLSQRQQQQTQLQQS
PLLLIQQNLSQRAQPQQQQQQQLQQLSQPSHSEQQLHFQLLQKLQQHQQLPSPASSVLQS
QQLQQQQQQTHQQHQQLQQSPLSQNQQPPLSQNQQPLGSNSFSTAALMQTQSFPMNQPQG
LQKPPMAVRARSSITDGEAPSCSTSPSTNNCQISPQNFLNRNHLAPAMLMGDSAIEPASN
LVQDLQNKSEIRVKNEFPSSRGLDQLKYKGAVTDQLEASSSGTSYCLDAGNIQQNFSVPT
FGLDSDVQSHPRNSLPFASNIDALAPDTLLSRGYDSQKDLQNLLANYGGTTRDIETELST
AAISSQSFAVPNIPFKPGCSNDVAINDTGVLNNGLWTNQTNQTQRMRTYTKVQKRGSVGR
SIDVTRYKGYNELRHDLARMFGIEGQLEDPQSSDWKLVYVDHENDILLVGDDPWEEFVSC
VQSIKILSSAEVQQMSLDGDLGNVPVPNQACSGTNSGNVWRGQYDDNSAASFNR
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttccttcaaatggattcttgccaaattttgcagaaggggaaagaaaatgcatc
aattcagagttgtggcatgcttgtgctgggccactggtttccttgcctccagttggaagc
ctcgtagtttacttccctcaaggccacagtgagcaggttgcagcatcaatgcaaaaggag
actgatttcatacccagctaccccaaccttccttccaagttgatttgtatgcttcataat
gtcacattgcatgctgatgtggaaactgatgaggtctatgcacagatgacccttcaacca
gtaagcaaatatgagaaggaagcactgctagcgtctgacatggggctaaagcaaaacagg
caacctaccgagttcttctgcaaaactcttacagctagtgatacaagtactcatggtgga
ttttctgtacctcgtcgagcagctgagaagatcttccctcctctagacttttcaatgcaa
ccacctgctcaggagctggtggccagagatttacacgacaatacatggacgtttaggcat
atttatcgagggcaaccaaaaaggcacctgctcactacaggttggagtgtctttgtcagc
acaaaaagactttttgctggtgattccgttctattcataagagatgagaaatcacagctt
ctcttgggtataaggcgtgctaatagacaacaaccagctctctcttcatcagttatatcc
agtgatagtatgcatattggaattcttgctgccgcagctcatgctgctgcaaacaacagc
ccattcactatattctacaatccaagggcaagcccttctgagtttgtgattcccttctcc
aagtataataaagccttgtacacgcaagtgtcacttggcatgagatttagaatgatgttt
gagactgaagagtcaggagtccgcagatacatgggtacaatcactggtatcagtgatatg
gatccagtgcgctggaaaaattcgcagtggcgcaatcttcaggttgggtgggatgaatca
actgcaggtgaacggccaagcagagtttcgatttgggagattgagcctgttgtaactcct
ttctacatatatccacctccgtttttcagaccaaagttccctaagcagccagggatgcca
gatgacgattctgatatagagaatgcttttaagagagccatgccttggcttggagatgaa
tttggcatgaaggatcccccaagctcaatctttcctggtttgagcttagttcaatggatg
agcatgcagcaaaataatcagtttccagctactcaatcaggattattcccatcgatggtt
ccttccaatgccctgcataataatcttagcactgatgatccatcaaaggtattgaatttt
caagcccctggcctatctcctccaagtgtccaacttaacaagacaaatccacaaaaccaa
gtcggtcagttgcctcagccaccaatggcatggactcaacaacagcagctgcaacaatta
ttgcagactcctattaaccaacagcagccaccttatccacatcagcagcagcagcagcca
ccttatccacatcagcagcagcagcagcagcaacctatttcccaacagcaacagcatcag
cattggccacagcaacagcaacagccgcagctgcagccaccacaaatacgacaaccacca
ccacaaatacaacagcatcaacagcagcagcagattttccaaccacctacactcaatgac
agtgtggttgcccctaaccaaattccaaatcagaatttgcagcaaccagttgtatactct
cagcttcagcagcagcagcagttactggcaagcaatacccaatcccaaagcataccttct
gctaataaaagttcatatccactgacctctttaccacaagactcacagcttcatcaacaa
atggagcaacaatctaacctctcacagagacaacagcagcagactcaattgcaacagtcc
cctctgctgttgatacagcaaaacctatcacagagggcacagccacagcaacagcaacag
caacaattgcaacaactatcacagcccagccactctgagcaacagcttcactttcagtta
ctacagaagttgcagcagcatcagcagttgccctcccctgcaagctcagttctgcagtct
cagcagctacagcaacaacaacagcagacccaccagcaacaccagcaacttcagcagtca
cctctgtcacagaatcagcagccacctctgtcacagaatcagcagccacttggcagtaac
agcttctcaacagccgcacttatgcaaacacaatcttttcctatgaaccagccccaagga
ttgcagaaaccacctatggcagttagagcacgttcaagtattacagatggagaagcgcca
tcttgttcaacctcaccttccactaataattgccagatttctccacaaaatttcctgaac
agaaaccatctagctccggccatgttgatgggtgattcagctattgagcctgcaagtaat
cttgttcaagatctccaaaacaagtctgaaattcgtgtcaagaatgagtttcccagctca
agaggtctagaccaactaaaatataaaggtgctgtgactgatcaattggaagcttcctct
tccggaacatcatattgcctagatgctggtaacatccagcagaatttctcagtcccaacc
tttggcttggatagtgatgtccagtcacatcctcgaaacagtcttccttttgcatctaat
attgatgctttggcacccgatactttattgtcaaggggatatgactctcaaaaggatctt
cagaacttgcttgctaattatggtggtactacacgagatattgagacagagttgtccaca
gctgcaattagctcccagtcatttgctgtgccaaacatacctttcaagcctggttgttcg
aatgacgttgccatcaatgatactggggttttgaacaatggattgtggaccaaccagacc
aaccagactcaacggatgcgtacatatacgaaggtccaaaagcgtggctcagttggaaga
tctattgatgtcactcgttataaaggttataacgagctgagacatgatcttgcccgaatg
tttggcattgaagggcaactagaagatccacaaagttcagactggaaactggtttatgtt
gatcatgaaaatgacatattacttgttggagacgatccttgggaggagttcgtgagctgt
gttcagagcataaagatactgtcatctgctgaagtgcaacagatgagcttggatggagat
cttggtaatgtgcctgttcccaatcaagcttgtagtggcactaacagtggaaatgtctgg
agggggcagtatgatgataattcagctgcctcatttaacagataa
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