Populus trichocarpa (black cottonwood): 18100314
Help
Entry
18100314 CDS
T01077
Name
(RefSeq) actin-66 isoform X1
KO
K10355
actin, other eukaryote
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
18100314
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pop04812
]
18100314
Cytoskeleton proteins [BR:
pop04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
18100314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
18100314
NCBI-ProteinID:
XP_006381600
LinkDB
All DBs
Position
6:11693410..11696716
Genome browser
AA seq
400 aa
AA seq
DB search
MSVYSLPSTDILCQSSRSSFHSTGMDFLDSRPIVCDNGSGLMKAGFAGDDVPCVVFPNLI
GRPRNKHAMVSMGQKDMYFGDEAEARRGVLSLSYPIHHGIVRCWEGIESVWEHTFDQELR
VSTEEHPVLLTEAPLNPKINREKMVEIMFEGFNIPATYIAIQAVLSLYASGRTTGIVMDS
GEGVTHVVPIYEGYALPHAIHRLDLAGKDITDYLTKILAEDGYIFTSTAEKEIARDIKER
ISYVAMDFERELETSRKSAALDKQYELPDGQVITIGAAQFKCPEVLFDPSRVGMDSGGVH
EIVVRSISRCDVDIRREMFGNVVLSGGTTVIPGLAERLAKEVSSLAPPGVRVRVVAPPER
KYSVWIGGSILGSLSTFQQMWISKEEYMESGSSIVHMKCF
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgtactctctaccttctacagatattctctgtcaatcatctagatcgagtttt
catagcacaggcatggatttcttagacagcaggccaattgtctgcgacaatggatcaggc
ttaatgaaggctggttttgccggtgatgatgttccatgtgtggtattccccaatttaata
ggccgaccacgaaacaagcatgcaatggtcagcatgggacaaaaggatatgtattttgga
gacgaagcagaagcaaggcgtggagttcttagtttaagctaccccatacatcatggaatt
gtgagatgctgggaaggaattgaaagcgtttgggagcatacctttgatcaggagctccga
gtttccacagaggagcatcctgttcttttaacagaggctccactcaatcccaaaattaac
agagaaaagatggtggagatcatgtttgaaggttttaacattcctgcaacctatatagcc
atccaggcggttttatcgttgtatgccagtggccgaactacaggtattgttatggactct
ggagaaggtgtgacacatgtagttccaatatacgagggctatgcgctgccacacgccatc
catagacttgacttggcaggaaaggacattacggactacctcaccaaaatcctagctgaa
gacggctacattttcacctctacagctgagaaagaaattgctagagacatcaaagagcga
atttcctacgtggcaatggattttgaaagagagcttgaaacatcaaggaaaagtgcagca
ctagacaaacaatatgaattgccggatggacaagtcataaccattggagctgcgcagttc
aagtgcccggaagttctgtttgatccgagtagagtaggaatggattcaggtggtgtgcat
gagattgtggtgaggtcaatcagcaggtgcgatgtagacatcagaagagagatgtttggg
aatgtggtgcttagtgggggtaccactgtgataccaggcctcgctgaaaggttggccaaa
gaggtcagctcattggcgccgcctggtgtgagggtacgagtggttgctccaccagagagg
aagtacagtgtttggattggtggctccatcttgggttccttaagcacctttcagcagatg
tggatatccaaggaggagtatatggagtctggatcttccattgtgcacatgaaatgtttc
tga
DBGET
integrated database retrieval system
