Populus trichocarpa (black cottonwood): 18100336
Help
Entry
18100336 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18100336
KO
K16609
tubulin--tyrosine ligase-like protein 12
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pop04812
]
18100336
Cytoskeleton proteins [BR:
pop04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Other tubulin modification proteins
18100336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
LRR_4
LRR_8
LRR_NXF1-5
AI2M-like_HNH
Motif
Other DBs
NCBI-GeneID:
18100336
NCBI-ProteinID:
XP_006381623
UniProt:
B9MSZ1
LinkDB
All DBs
Position
6:complement(11947028..11955125)
Genome browser
AA seq
868 aa
AA seq
DB search
MTKIQAYEDFVKVHGILLAASGLPRTLHRKLFDKLTSETFDGGAYFQVDPCQDGRQRRLL
LTSAASMPKDSNVFLIDHAWTFRLSDAYKQLQEVPGLAQRMAALMCVDIDSNSDVEEIDG
DGVSRDTYSKLNVTDIVENEIGYAKERGYDTVKWLELEELDIDDDMLLSLDLSSKFPDLL
ALSLCGNKLENVEIVVQEVTKLKNLKALWLNNNPVLENCDGCMADTIFKGCPGLEIYNSC
FTSNFGEWALGFCGGVYEKDNPCPIHQDNHPLQSVTSLDLSNRSIHSLINKAFSPVEMPS
LSHLNIRGNPLKQNSVSELFKVLKGFTSLQTLEVDLPGPLGESAIEILESVPNLSQLNGV
NVSKILETGNHVIDAVLQPRLPEWTAEEPLADRVINAMWLYLMTYRLADEEKIDETSVWY
VMDELGSALRHSDEPNFRVAPFLFMPEGNLDSAVSYSILWPIQNVQNGDECTRDFLFGIG
EDKQRSARLTAYFHTPQYYFIQEYEKFHQKLQSKSSTPLPVKSSSSRTLRRTDGCALRVY
TDLPQVEGFLTRTEFIITTELKDADIIWTGMQVDDDVKRAAGITDQQYINQFPFEACLVM
KHHLAETIQKAHGSPDWLHPTYNLESHLSQLIGDYYARKRDGMNNLWILKPWNMARTIDT
TVTDNLSAIIRLMETGPKICQKYIEHPALFEGKKFDIRYIVLVRSVKPLELFLADVFWVR
LANNQYTLDKHSLFEYETHFTVMNYRGILNHKNTPEFVKEFEQEHQVKWLDIHERVRNMI
RSVFEAAATVHPEMHSPMSRAMYGVDVMLDSSFQPKLLEVTYCPDCTRACKYDTQAIGGG
GELLKGSDFYNYVFGCLFLDETRHVCPL
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaatacaagcttacgaggacttcgtgaaggtccacggcatccttttagcagcc
tcaggactacctcgtacactgcaccgcaaactgttcgacaaacttacttccgagactttc
gatggcggcgcctacttccaagtcgacccatgccaggatggccgtcagaggcgcctcctc
cttacctctgccgcctccatgcccaaagattccaacgtttttctcattgaccacgcctgg
acttttcgcctctccgatgcttataaacagcttcaagaagtgccagggttagcccagaga
atggctgctttgatgtgtgtggatattgattcaaattccgatgttgaagagatagatggg
gatggagtttcacgagacacctattcaaaattgaatgtcactgacattgttgagaatgaa
attggttatgcgaaagagagaggctatgacactgttaagtggttggagcttgaggaactt
gacattgacgatgacatgcttctctctcttgatttgtctagtaaatttccggatttacta
gcacttagcctatgtggaaacaagctcgagaatgttgaaatagttgtgcaggaagttacc
aaattgaaaaacctaaaagctctctggctgaataacaatccagttctagaaaactgtgat
ggttgtatggcagatacaattttcaagggatgtccagggctcgaaatctacaactcatgt
ttcactagtaattttggtgagtgggccttgggattttgcggaggagtttatgagaaggat
aatccttgccctatccatcaggacaaccatccattgcagagtgtgacatctctcgacctt
tcaaacagaagtattcattctctcattaacaaggcattttctcctgttgagatgccttct
ctttcacatctgaatattcgaggaaatcctctgaagcagaattcagttagtgagctgttc
aaagtattgaaggggtttactagtttgcaaactttagaggtggatttacctggaccccta
ggagagagtgctatagaaattcttgaatctgttccaaatctttctcagttgaatggcgtc
aatgtatcaaaaatattagaaactggaaaccatgtaatcgatgctgtacttcagccacgc
cttcctgaatggacagctgaagagcctcttgctgatcgtgttattaatgcaatgtggtta
tatttgatgacatatagacttgcagacgaggaaaagattgatgaaacctctgtgtggtat
gtaatggatgaactaggttcagctttaaggcacagtgatgaaccaaatttcagggtggct
ccttttctcttcatgccagagggaaatctggattctgctgtgagctattccatattatgg
ccaatccagaatgttcaaaatggagatgaatgcactcgtgatttcctatttggtattggg
gaggacaagcaacgttctgccaggcttacagcatatttccatacaccacaatattatttt
attcaggagtatgagaaattccatcagaagttgcaatcaaaaagttcaactcccttgcca
gtgaagtcatcttccagcagaaccttacgtcgtactgatggatgtgctttgcgtgtgtac
actgacttacctcaagtggaaggatttttgacacgtactgaatttataatcaccacagag
ttgaaggatgcagacattatatggacaggcatgcaggtggatgatgatgtcaaaagagct
gctggaattacagatcagcaatatataaaccaatttcctttcgaagcttgtcttgtcatg
aaacatcatttggcagagactattcaaaaggcacatggatctcctgattggttgcatcct
acttacaatttagaatcacatctctctcaacttattggcgactattatgcacgcaaaaga
gatggaatgaacaacctatggatcttaaaaccatggaacatggcccggactattgataca
actgtaacagataatttgtctgctattatccgcctgatggaaactggtccaaaaatatgc
cagaaatatatcgagcatcctgctctgttcgaaggcaagaaatttgatatccgttatata
gtactggttcgcagtgtgaagcctctggaactgttccttgcagatgttttctgggttagg
ttggcaaacaaccaatacactcttgacaagcacagcctttttgagtacgagacccacttt
actgttatgaactatcgtggaatattgaatcacaagaacactccagagtttgtgaaggaa
tttgaacaggagcaccaagttaaatggttggatatccatgagagagtgagaaatatgatt
cgatctgttttcgaggcagctgcaacagtacatccagagatgcatagtccaatgtccagg
gcaatgtatggcgtggatgtcatgcttgatagctctttccagccaaagttattggaggtc
acttactgtccagactgtacaagagcatgcaagtatgatacacaagctataggtggaggg
ggagaattattgaaaggtagtgatttctacaattatgtgtttggttgtctctttcttgat
gaaactagacatgtgtgcccattgtaa
DBGET
integrated database retrieval system
